RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PPP1R27Q86WC6 154 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 ZNF573Q86YE8 665 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 C11orf42Q8N5U0 333 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
SKP1-203ENST00000517625 DHTKD1Q96HY7 919 aaPredicted RBP2.2□□□□□ -2.06
SKP1-203ENST00000517625 MAGEB18Q96M61 343 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 C16orf45Q96MC5 204 aaPredicted RBP2.2□□□□□ -2.06
SKP1-203ENST00000517625 SMIM14Q96QK8 99 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 TMEM121Q9BTD3 319 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 TSSK1BQ9BXA7 367 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 GSDMCQ9BYG8 508 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 YTHDF1Q9BYJ9 559 aaKnown RBP2.2□□□□□ -2.06
SKP1-203ENST00000517625 DPH5Q9H2P9 285 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 EHD1Q9H4M9 534 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 FARSBQ9NSD9 589 aaKnown RBP2.2□□□□□ -2.06
SKP1-203ENST00000517625 DCDC2Q9UHG0 476 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 ANAPC7Q9UJX3 599 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 MFHAS1Q9Y4C4 1052 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 TNRQ92752 1358 aa2.2□□□□□ -2.06
SKP1-203ENST00000517625 ATP8B3O60423 1300 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 RGSL1A5PLK6 1076 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 C19orf81C9J6K1 198 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 ANGPT2O15123 496 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 HDAC3O15379 428 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 UGT2B17O75795 530 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 IGHV3-23P01764 117 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 SEMG1P04279 462 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 PSMB1P20618 241 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 PTBP1P26599 531 aaKnown RBP eCLIP2.19□□□□□ -2.06
SKP1-203ENST00000517625 KIR2DS2P43631 304 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 NOVA1P51513 510 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 RGS1Q08116 209 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 NDUFA9Q16795 377 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 RNF212Q495C1 297 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 RABGAP1LQ5R372 815 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 CELF3Q5SZQ8 465 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 DNM1P46Q6ZS02 220 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 LANCL3Q6ZV70 420 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 APTXQ7Z2E3 356 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 OR10T2Q8NGX3 314 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 NANPQ8TBE9 248 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 AENQ8WTP8 325 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 PSMG2Q969U7 264 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 CYYR1Q96J86 154 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 CITED1Q99966 193 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 MAPKAP1Q9BPZ7 522 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 Q9H3A6 140 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 DHX33Q9H6R0 707 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.19□□□□□ -2.06
SKP1-203ENST00000517625 ADAM22Q9P0K1 906 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 WRAP73Q9P2S5 460 aaPredicted RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 WDR45Q9Y484 360 aa2.19□□□□□ -2.06
SKP1-203ENST00000517625 DDX49Q9Y6V7 483 aaKnown RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 KMT2BQ9UMN6 2715 aaPredicted RBP2.19□□□□□ -2.06
SKP1-203ENST00000517625 SF3B1O75533 1304 aaKnown RBP eCLIP2.18□□□□□ -2.06
SKP1-203ENST00000517625 GON4LQ3T8J9 2241 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 SMIM28A0A1B0GU29 152 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 ESYT2A0FGR8 921 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 ZFP92A6NM28 416 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 PP2D1A8MPX8 630 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 SDHDO14521 159 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 TBL1XO60907 577 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 SCRG1O75711 98 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 DIRAS3O95661 229 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 ASNSP08243 561 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 H2BFMP0C1H6 154 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 PGCP20142 388 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 TPSB2P20231 275 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 SERPINA2P20848 420 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 CD80P33681 288 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 RPL29P47914 159 aaKnown RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 MRPS11P82912 194 aaKnown RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 RAB40BQ12829 278 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 MESDQ14696 234 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 RFTN1Q14699 578 aaPredicted RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 TPSAB1Q15661 275 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 LRRC36Q1X8D7 754 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 FAM120AOSQ5T036 256 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 FRA10AC1Q70Z53 315 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 C17orf82Q86X59 251 aaPredicted RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 ZNF677Q86XU0 584 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 SKA3Q8IX90 412 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 CLDN19Q8N6F1 224 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 TEX9Q8N6V9 391 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 OR9A1PQ8NGU1 263 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 LINC01006Q8NI28 216 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 RAET1EQ8TD07 263 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 SETD7Q8WTS6 366 aaKnown RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 SPRYD4Q8WW59 207 aaPredicted RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 TRUB1Q8WWH5 349 aaKnown RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 SLC5A11Q8WWX8 675 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 THUMPD2Q9BTF0 503 aaKnown RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 CRNKL1Q9BZJ0 848 aaKnown RBP2.18□□□□□ -2.06
SKP1-203ENST00000517625 RIBC2Q9H4K1 309 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 ZNF385DQ9H6B1 395 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 CAB39LQ9H9S4 337 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 NUDT15Q9NV35 164 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 OR1A1Q9P1Q5 309 aa2.18□□□□□ -2.06
SKP1-203ENST00000517625 ZNF256Q9Y2P7 627 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms