RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ADAD1Q96M93 576 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 OR52D1Q9H346 318 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 DPEP2Q9H4A9 486 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TAAR2Q9P1P5 351 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 KIF25Q9UIL4 384 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 RCE1Q9Y256 329 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 AK6Q9Y3D8 172 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SIP14410 1827 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 METTL21EPA6NDL7 271 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TRABD2BA6NFA1 517 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 LRRC72A6NJI9 287 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 HEPACAM2A8MVW5 462 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 AXIN1O15169 862 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SHOXO15266 292 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 CCL16O15467 120 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PLA2G10O15496 165 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 FRS3O43559 492 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 MTRF1O75570 445 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ETHE1O95571 254 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 C8AP07357 584 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GTF2F2P13984 249 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 ELNP15502 786 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 NPPBP16860 134 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PTNP21246 168 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 HTR2AP28223 471 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 CTSOP43234 321 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SLC6A11P48066 632 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 GDI2P50395 445 aaKnown RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 LIM2P55344 173 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SEC13P55735 322 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 DBPQ10586 325 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PDE7AQ13946 482 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 PUM1Q14671 1186 aaKnown RBP eCLIP6.25□□□□□ -1.41
CPNE3-203ENST00000517490 C1orf94Q6P1W5 598 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 DPPA4Q7L190 304 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 FAM129CQ86XR2 697 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 LIX1LQ8IVB5 337 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 LAS2Q8IYD9 372 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 OR5T2Q8NGG2 359 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 UPRTQ96BW1 309 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 C4orf36Q96KX1 117 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 HSPA12BQ96MM6 686 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 POTEKPQ9BYX7 375 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TTTY10Q9BZA0 68 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 DPH1Q9BZG8 443 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SDHAF2Q9NX18 166 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 SLC7A7Q9UM01 511 aa6.25□□□□□ -1.41
CPNE3-203ENST00000517490 LINC00862A6NCI5 91 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TEX46H3BTG2 121 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SCO1O75880 301 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 RPP14O95059 124 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 WDPCPO95876 746 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 DBIP07108 87 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF806P0C7X5 589 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GALP22466 123 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CCR6P51684 374 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 E2F1Q01094 437 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CRYZQ08257 329 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ARHGAP19Q14CB8 494 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ENTPD8Q5MY95 495 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CCNJQ5T5M9 372 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HES5Q5TA89 166 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CFAP77Q6ZQR2 320 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HTR3DQ70Z44 454 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GPR155Q7Z3F1 870 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ASB12Q8WXK4 309 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 IRF7Q92985 503 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PMEPA1Q969W9 287 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TM4SF18Q96CE8 201 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 MNTQ99583 582 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 C20orf85Q9H1P6 137 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM185BQ9H7F4 350 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM184CQ9NVA4 438 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 DEC1Q9P2X7 70 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 DPP7Q9UHL4 492 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 NOP16Q9Y3C1 178 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HEBP2Q9Y5Z4 205 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 COL11A1P12107 1806 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GXYLT2A0PJZ3 443 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 FAM183AA6NL82 134 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ERVH48-1M5A8F1 160 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 NUPL2O15504 423 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GATBO75879 557 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CXCL14O95715 111 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CYBAP13498 195 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TRIM23P36406 574 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 FBXW4P57775 412 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 BAMBIQ13145 260 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 MRPL58Q14197 206 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 AMZ1Q400G9 498 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 FAM26DQ5JW98 314 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 MBOAT2Q6ZWT7 520 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TMED4Q7Z7H5 227 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CACUL1Q86Y37 369 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 BEST3Q8N1M1 668 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 EID2Q8N6I1 236 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HCAR2Q8TDS4 363 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SCARB1Q8WTV0 552 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF416Q9BWM5 594 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms