RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 FCARP24071 287 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 LIM2P55344 173 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 NLRP11P59045 1033 aaKnown RBP0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RND3P61587 244 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 VLDLRP98155 873 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 IL9RQ01113 521 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 KLHL30Q0D2K2 578 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 PSG5Q15238 335 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 UBE2SQ16763 222 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 COX19Q49B96 90 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 PNCKQ6P2M8 343 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CFAP161Q6P656 301 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CWC27Q6UX04 472 aaKnown RBP0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 GDPD3Q7L5L3 318 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SLC22A16Q86VW1 577 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 STHQ8IWL8 128 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 COLGALT1Q8NBJ5 622 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RAET1EQ8TD07 263 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 IL1F10Q8WWZ1 152 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CORO2AQ92828 525 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 FAM162AQ96A26 154 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RAB39BQ96DA2 213 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 DDX50Q9BQ39 737 aaKnown RBP0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 NDFIP1Q9BT67 221 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CARD6Q9BX69 1037 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 NLNQ9BYT8 704 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SLC25A22Q9H936 323 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 TUFT1Q9NNX1 390 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 FAM114A2Q9NRY5 505 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RBM28Q9NW13 759 aaKnown RBP0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ENTPD4Q9Y227 616 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 MAB21L2Q9Y586 359 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 IGSF9BQ9UPX0 1349 aa0.55□□□□□ -2.32
RNU6-1338P-201ENST00000516328 TRAV34A0A0B4J273 112 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ZNF878C9JN71 531 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 J3QKU1 62 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CRCPO75575 148 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 DEDDO75618 318 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SLC16A8O95907 504 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RFC2P35250 354 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 PSMD8P48556 350 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 WASHC5Q12768 1159 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 STXBP2Q15833 593 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 NCR3LG1Q68D85 454 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 C6orf89Q6UWU4 347 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 HACD2Q6Y1H2 254 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 DPY19L2P2Q6ZN68 376 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 MSANTD1Q6ZTZ1 278 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 LINC00336Q6ZUF6 198 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 VRK2Q86Y07 508 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CENPSQ8N2Z9 138 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 PNKDQ8N490 385 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 OR9A4Q8NGU2 314 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RAB7BQ96AH8 199 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 EPSTI1Q96J88 318 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 RNF126Q9BV68 326 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 DMAP1Q9NPF5 467 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ZNF230Q9UIE0 474 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 GNPTGQ9UJJ9 305 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 EXOSC1Q9Y3B2 195 aaKnown RBP0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 UGT2A1Q9Y4X1 527 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 TTC21BQ7Z4L5 1316 aa0.54□□□□□ -2.32
RNU6-1338P-201ENST00000516328 OOEPA6NGQ2 149 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CHEK1O14757 476 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ARPC1BO15143 372 aaKnown RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 WDR46O15213 610 aaKnown RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 JCHAINP01591 159 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SFTPBP07988 381 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 GIPP09681 153 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 HIST1H2AGP0C0S8 130 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 P0C880 135 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 NPY2RP49146 381 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 EFNB2P52799 333 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 CRISP1P54107 249 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 KARSQ15046 597 aaKnown RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SLX4IPQ5VYV7 408 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 HIST2H2AA3Q6FI13 130 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 PCP2Q8IVA1 136 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 BPIFB2Q8N4F0 458 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 MLKLQ8NB16 471 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 OR8H1Q8NGG4 311 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ZNF461Q8TAF7 563 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 TRUB1Q8WWH5 349 aaKnown RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SELENOMQ8WWX9 145 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 HIST1H2ACQ93077 130 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 OR10C1Q96KK4 312 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 GPR137Q96N19 417 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 ANKEF1Q9NU02 776 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 AIG1Q9NVV5 245 aa0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 DUS2Q9NX74 493 aaKnown RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 MRPS2Q9Y399 296 aaKnown RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 TET2Q6N021 2002 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1338P-201ENST00000516328 SDK2Q58EX2 2172 aa0.52□□□□□ -2.33
RNU6-1338P-201ENST00000516328 C13orf42A0A1B0GVH6 325 aa0.52□□□□□ -2.33
RNU6-1338P-201ENST00000516328 C16orf90A8MZG2 172 aa0.52□□□□□ -2.33
RNU6-1338P-201ENST00000516328 SULT2B1O00204 365 aa0.52□□□□□ -2.33
RNU6-1338P-201ENST00000516328 TLR4O00206 839 aa0.52□□□□□ -2.33
RNU6-1338P-201ENST00000516328 FOXE1O00358 373 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1338P-201ENST00000516328 TM9SF1O15321 606 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms