RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PPIAL4GP0DN37 164 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 MBL2P11226 248 aaPredicted RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 UQCRBP14927 111 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 GATA2P23769 480 aaPredicted RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 PGFP49763 221 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 NDST1P52848 882 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 SUCLG1P53597 346 aaKnown RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 XGP55808 180 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 NUCB2P80303 420 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 CNTN2Q02246 1040 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 CSTF1Q05048 431 aaKnown RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 EXOSC2Q13868 293 aaKnown RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 KLF5Q13887 457 aaPredicted RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 MESDQ14696 234 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 SSX2Q16385 188 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 HAGHQ16775 308 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 ZNF343Q6P1L6 599 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 C3P1Q6ZMU1 363 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 Q6ZPB1 254 aaPredicted RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 Q6ZRG5 221 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 P4HA3Q7Z4N8 544 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 CDC20BQ86Y33 519 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 CACUL1Q86Y37 369 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 SLC22A9Q8IVM8 553 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 LRRC75A-AS1Q8N1F1 130 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 ARFGAP2Q8N6H7 521 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 ANKFN1Q8N957 763 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 NECAB1Q8N987 351 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 SYT14Q8NB59 555 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 OR52J3Q8NH60 311 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 ZNF671Q8TAW3 534 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 SMPDL3AQ92484 453 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 DCPSQ96C86 337 aaKnown RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 RASD2Q96D21 266 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 OMA1Q96E52 524 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 ZNF414Q96IQ9 312 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 C2orf48Q96LS8 159 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 AGAP4Q96P64 663 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 NEDD4LQ96PU5 975 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 GSDMCQ9BYG8 508 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 KAT8Q9H7Z6 458 aaKnown RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 MED17Q9NVC6 651 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 DDX18Q9NVP1 670 aaKnown RBP2.62□□□□□ -1.99
HERC4-215ENST00000515753 CRLS1Q9UJA2 301 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 MOB4Q9Y3A3 225 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 BTAF1O14981 1849 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 COL24A1Q17RW2 1714 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 MON2Q7Z3U7 1717 aa2.62□□□□□ -1.99
HERC4-215ENST00000515753 CEMIPQ8WUJ3 1361 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 IBTKQ9P2D0 1353 aaPredicted RBP2.61□□□□□ -1.99
HERC4-215ENST00000515753 AKAP12Q02952 1782 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 HCFC1P51610 2035 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GOLGA8OA6NCC3 632 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 MFSD2BA6NFX1 497 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GOLGA8NF8WBI6 632 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 SLC1A7O00341 560 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 SH2D1BO14796 132 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 TFECO14948 347 aaPredicted RBP2.61□□□□□ -1.99
HERC4-215ENST00000515753 SURF4O15260 269 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 ALOX15BO15296 676 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 CFLARO15519 480 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 ZNF264O43296 627 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 MED7O43513 233 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 LCMT2O60294 686 aaKnown RBP2.61□□□□□ -1.99
HERC4-215ENST00000515753 TSPAN2O60636 221 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 SRSF10O75494 262 aaKnown RBP2.61□□□□□ -1.99
HERC4-215ENST00000515753 WBP4O75554 376 aaKnown RBP2.61□□□□□ -1.99
HERC4-215ENST00000515753 MBD3O95983 291 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 AGTP01019 485 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 SLC35G4P0C7Q5 338 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GZMAP12544 262 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 CCDC130P13994 396 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 CAPN2P17655 700 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 NCF2P19878 526 aaPredicted RBP2.61□□□□□ -1.99
HERC4-215ENST00000515753 HNF1AP20823 631 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 PRKAR2BP31323 418 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 SOX3P41225 446 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 FHITP49789 147 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 SGSHP51688 502 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 PRRX1P54821 245 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 NAAAQ02083 359 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 PAX8Q06710 450 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 C3AR1Q16581 482 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 CDKN3Q16667 212 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 DUSP5Q16690 384 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 HKDC1Q2TB90 917 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 FAM106AQ4KMX7 169 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 LINC01620Q4KN68 170 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 CAVIN4Q5BKX8 364 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 PHYHD1Q5SRE7 291 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 ATP1A1-AS1Q5TC04 95 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 TMEM225Q6GV28 225 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 ANGPTL8Q6UXH0 198 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GDPGP1Q6ZNW5 385 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GPRIN3Q6ZVF9 776 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GPR142Q7Z601 462 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 EFCAB13Q8IY85 973 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 UBQLNLQ8IYU4 475 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 OTUD6BQ8N6M0 293 aa2.61□□□□□ -1.99
HERC4-215ENST00000515753 GVQW1Q8N7I0 195 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms