RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SEC14L5O43304 696 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 SCN2BO60939 215 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 CTAG2O75638 210 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 TNFSF13O75888 250 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 CRHP06850 196 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 ZNF17P17021 662 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 ATP6V1C1P21283 382 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 OCRLQ01968 901 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 FLYWCH1Q4VC44 716 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 DCST2Q5T1A1 773 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 OR2A2Q6IF42 318 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 GTPBP8Q8N3Z3 284 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-230ENST00000514537 METTL25Q8N6Q8 603 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 FIG4Q92562 907 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 OR7D2Q96RA2 312 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 MED17Q9NVC6 651 aa20.76■□□□□ 0.91
CLDND1-230ENST00000514537 A0A1W2PNV4 684 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 C7orf72A4D263 438 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 SNNO75324 88 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-230ENST00000514537 SOAT1P35610 550 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 PHC1P78364 1004 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 SORDQ00796 357 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 KLHL26Q53HC5 615 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 OGFOD2Q6N063 350 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 C6orf120Q7Z4R8 191 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 MTERF4Q7Z6M4 381 aaKnown RBP20.75■□□□□ 0.91
CLDND1-230ENST00000514537 B4GALNT2Q8NHY0 566 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 ZBTB8AQ96BR9 441 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 TESCQ96BS2 214 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 TLCD1Q96CP7 247 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 SH3YL1Q96HL8 342 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-230ENST00000514537 NPAS1Q99742 590 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 RBM24Q9BX46 236 aaKnown RBP20.75■□□□□ 0.91
CLDND1-230ENST00000514537 PINK1Q9BXM7 581 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 TMBIM4Q9HC24 238 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 THAP1Q9NVV9 213 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 STOML1Q9UBI4 398 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 ZNF175Q9Y473 711 aa20.75■□□□□ 0.91
CLDND1-230ENST00000514537 PRSS51A0A1B0GVH4 220 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 TUBAL3A6NHL2 446 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 NPIPB9F8W1W9 429 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 PSMA4P25789 261 aaKnown RBP20.74■□□□□ 0.91
CLDND1-230ENST00000514537 ATP12AP54707 1039 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 RPS3AP61247 264 aaKnown RBP20.74■□□□□ 0.91
CLDND1-230ENST00000514537 MAGOHP61326 146 aaKnown RBP20.74■□□□□ 0.91
CLDND1-230ENST00000514537 DAZAP2Q15038 168 aaPredicted RBP20.74■□□□□ 0.91
CLDND1-230ENST00000514537 PLPPR5Q32ZL2 321 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 LUZP2Q86TE4 346 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 GGNQ86UU5 652 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 OR5D16Q8NGK9 328 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 MGARPQ8TDB4 240 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 SMPDL3BQ92485 455 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 ZNF845Q96IR2 970 aaPredicted RBP20.74■□□□□ 0.91
CLDND1-230ENST00000514537 KLHDC3Q9BQ90 382 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 SERHL2Q9H4I8 314 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 ITGB1BP2Q9UKP3 347 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 PACSIN3Q9UKS6 424 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 PCDHGB4Q9UN71 923 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 MED12LQ86YW9 2145 aa20.74■□□□□ 0.91
CLDND1-230ENST00000514537 ANKRD17O75179 2603 aaKnown RBP20.73■□□□□ 0.91
CLDND1-230ENST00000514537 NPIPA5A0A0B4J1W7 369 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 DUXAA6NLW8 204 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 A8MXE2 369 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 NPIPA7E9PJI5 369 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 SDHDO14521 159 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 NPIPA8P0DM63 369 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 MATN1P21941 496 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 ZNF41P51814 821 aaPredicted RBP20.73■□□□□ 0.91
CLDND1-230ENST00000514537 CLNS1AP54105 237 aaKnown RBP20.73■□□□□ 0.91
CLDND1-230ENST00000514537 RPS26P62854 115 aaKnown RBP20.73■□□□□ 0.91
CLDND1-230ENST00000514537 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.73■□□□□ 0.91
CLDND1-230ENST00000514537 ANXA8L1Q5VT79 327 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 CLEC4FQ8N1N0 589 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 ZNF527Q8NB42 609 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 VPS37AQ8NEZ2 397 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 OR4A15Q8NGL6 344 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 FNDC9Q8TBE3 224 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 STARD4Q96DR4 205 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 SDF2Q99470 211 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 RNF122Q9H9V4 155 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 RASSF1Q9NS23 344 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 DNAJB12Q9NXW2 375 aaKnown RBP20.73■□□□□ 0.91
CLDND1-230ENST00000514537 GALNT8Q9NY28 637 aa20.73■□□□□ 0.91
CLDND1-230ENST00000514537 RNF103-CHMP3A0A140T963 221 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 ALDOCP09972 364 aaKnown RBP20.72■□□□□ 0.91
CLDND1-230ENST00000514537 EPXP11678 715 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 KIR2DL2P43627 348 aaPredicted RBP20.72■□□□□ 0.91
CLDND1-230ENST00000514537 RAC1P63000 192 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 ZNF117Q03924 483 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 CASP8Q14790 479 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 PON3Q15166 354 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 DPY19L1Q2PZI1 675 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 SPANXN4Q5MJ08 99 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 ATG16L1Q676U5 607 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 ANKRD46Q86W74 232 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 WDR75Q8IWA0 830 aaKnown RBP20.72■□□□□ 0.91
CLDND1-230ENST00000514537 CHDHQ8NE62 594 aaPredicted RBP20.72■□□□□ 0.91
CLDND1-230ENST00000514537 LINC01560Q8TB33 94 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 RAB3IL1Q8TBN0 382 aa20.72■□□□□ 0.91
CLDND1-230ENST00000514537 POC1BQ8TC44 478 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms