RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 MTERF4Q7Z6M4 381 aaKnown RBP12.66□□□□□ -0.38
USP46-209ENST00000514536 HMGN2P46Q86SG4 172 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 IFNEQ86WN2 208 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 B4GALNT2Q8NHY0 566 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 C1GALT1C1Q96EU7 318 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 TRNT1Q96Q11 434 aaKnown RBP12.66□□□□□ -0.38
USP46-209ENST00000514536 UGT2B28Q9BY64 529 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 SAP130Q9H0E3 1048 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 TP63Q9H3D4 680 aaPredicted RBP12.66□□□□□ -0.38
USP46-209ENST00000514536 HHATLQ9HCP6 504 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 POLE3Q9NRF9 147 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 SUCOQ9UBS9 1254 aaKnown RBP12.66□□□□□ -0.38
USP46-209ENST00000514536 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 E9PLN8 166 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 OIP5O43482 229 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 HCRTR2O43614 444 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 ZG16O60844 167 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 TNFRSF21O75509 655 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 CHRM4P08173 479 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 GUSBP08236 651 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 DRD4P21917 467 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 MSX1P28360 303 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 GCKP35557 465 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 STARP49675 285 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 HPCAP84074 193 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 MAPK14Q16539 360 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 ZNF630Q2M218 657 aaPredicted RBP12.65□□□□□ -0.38
USP46-209ENST00000514536 NDUFAF6Q330K2 333 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 NHSL2Q5HYW2 709 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 DCST1Q5T197 706 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 AP1ARQ63HQ0 302 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 LRRC74BQ6ZQY2 392 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 SPATA21Q7Z572 469 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 CPLX4Q7Z7G2 160 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 ZNF619Q8N2I2 560 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 OR5M1Q8NGP8 315 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 CCDC120Q96HB5 630 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 SFXN2Q96NB2 322 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 KLHDC3Q9BQ90 382 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 VKORC1Q9BQB6 163 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 RAD21L1Q9H4I0 556 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 MRGBPQ9NV56 204 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.38
USP46-209ENST00000514536 CARD8Q9Y2G2 431 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 DNAJC13O75165 2243 aa12.65□□□□□ -0.38
USP46-209ENST00000514536 HIVEP3Q5T1R4 2406 aa12.65□□□□□ -0.39
USP46-209ENST00000514536 TRBV5-3A0A0A0MS03 114 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 SERINC4A6NH21 518 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 FBP2O00757 339 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 KIAA0513O60268 411 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 KRT34O76011 436 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 ACTL6AO96019 429 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 NUDT7P0C024 238 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 TFPTP0C1Z6 253 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 PPIBP23284 216 aaKnown RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 ACVR2AP27037 513 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 GFRA1P56159 465 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 B3GALT5-AS1P59052 145 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 ZNF117Q03924 483 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 GANABQ14697 944 aaKnown RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 MAPK11Q15759 364 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 RUNDC3AQ59EK9 446 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 RAET1LQ5VY80 246 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 MTFR2Q6P444 385 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 CBLN3Q6UW01 205 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 EID3Q8N140 333 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 RPRMLQ8N4K4 120 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 DPP10Q8N608 796 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 QRSL1Q9H0R6 528 aaKnown RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 SLC38A1Q9H2H9 487 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 MTHFD2LQ9H903 347 aaPredicted RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 P2RX2Q9UBL9 471 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 CAMK2AQ9UQM7 478 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 VDAC3Q9Y277 283 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 MYO7BQ6PIF6 2116 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 FIGNL2A6NMB9 653 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 WDR1O75083 606 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 CYP7B1O75881 506 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 CHMP24386 653 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 ADSLP30566 484 aaPredicted RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 SRYQ05066 204 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 FADDQ13158 208 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 NFYCQ13952 458 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 GLYR1Q49A26 553 aaPredicted RBP12.64□□□□□ -0.39
USP46-209ENST00000514536 RTL6Q6ICC9 239 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 AAGABQ6PD74 315 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 ENPP6Q6UWR7 440 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 ULK2Q8IYT8 1036 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 MARVELD2Q8N4S9 558 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 SLC38A5Q8WUX1 472 aa12.64□□□□□ -0.39
USP46-209ENST00000514536 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms