RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, human

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPG1-208	ENST00000513965	PRKAA2	P54646	552 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	PKNOX1	P55347	436 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	BSPH1	Q075Z2	132 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	LCP2	Q13094	533 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	SLC29A2	Q14542	456 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	PLPPR5	Q32ZL2	321 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	GLE1	Q53GS7	698 aa	Known RBP	10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	NCMAP	Q5T1S8	102 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	PDSS1	Q5T2R2	415 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	SFRP5	Q5T4F7	317 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ADAM5	Q6NVV9	412 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	NOXRED1	Q6NXP6	359 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ESPNL	Q6ZVH7	1005 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ZAR1	Q86SH2	424 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	HIPK1	Q86Z02	1210 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	KBTBD8	Q8NFY9	601 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	POC1B	Q8TC44	478 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ZBTB8A	Q96BR9	441 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ZNF775	Q96BV0	537 aa	Predicted RBP	10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	C16orf58	Q96GQ5	468 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	FUT8	Q9BYC5	575 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	SHCBP1L	Q9BZQ2	653 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	SLCO5A1	Q9H2Y9	848 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	NGB	Q9NPG2	151 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	TAS2R7	Q9NYW3	318 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ZNF180	Q9UJW8	692 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	CHD3	Q12873	2000 aa	Known RBP	10.12	□□□□□ -0.79
COPG1-208	ENST00000513965	ATR	Q13535	2644 aa		10.12	□□□□□ -0.79
COPG1-208	ENST00000513965		A0A087WUV0	522 aa	Predicted RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	EXOC1L	A0A1B0GW35	172 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	DPRX	A6NFQ7	191 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	ALG1L2	C9J202	215 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	CD5L	O43866	347 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SSX4	O60224	188 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	RAMP1	O60894	148 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SEC22B	O75396	215 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	GCM2	O75603	506 aa	Predicted RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SLITRK5	O94991	958 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	NUDT14	O95848	222 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	IGHV4-39	P01824	125 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	GSTA1	P08263	222 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	PABPC4L	P0CB38	370 aa	Known RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	EFNA1	P20827	205 aa	Predicted RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	PSMA4	P25789	261 aa	Known RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	ADH6	P28332	368 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	GSTM5	P46439	218 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	STK11	Q15831	433 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	PGGHG	Q32M88	737 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	ZNF672	Q499Z4	452 aa	Predicted RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	VPS26B	Q4G0F5	336 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	CCNJ	Q5T5M9	372 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	RELL1	Q8IUW5	271 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SLC22A9	Q8IVM8	553 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	GABRG1	Q8N1C3	465 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SLC16A11	Q8NCK7	471 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	NUP43	Q8NFH3	380 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	OR2W6P	Q8NHA6	318 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.11	□□□□□ -0.79	9e-7	■■■□□ 18.4
COPG1-208	ENST00000513965	TMEM158	Q8WZ71	300 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	HSD17B8	Q92506	261 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	KISS1R	Q969F8	398 aa	Predicted RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	CHMP6	Q96FZ7	201 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	KLHL15	Q96M94	604 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	HS6ST2	Q96MM7	605 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SRXN1	Q9BYN0	137 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	ALG2	Q9H553	416 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	MYNN	Q9NPC7	610 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	TIGAR	Q9NQ88	270 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SIRT5	Q9NXA8	310 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	CISD1	Q9NZ45	108 aa	Known RBP	10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	SH3BP4	Q9P0V3	963 aa		10.11	□□□□□ -0.79
COPG1-208	ENST00000513965	IGHV3-15	A0A0B4J1V0	119 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965		A8MV72	311 aa	Predicted RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	SCD	O00767	359 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	TLX2	O43763	284 aa	Predicted RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	EFNA2	O43921	213 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	PRKD3	O94806	890 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	KCNK2	O95069	426 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	NKX2-2	O95096	273 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	ACP2	P11117	423 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	ENPP1	P22413	925 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	PRIM2	P49643	509 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	MANF	P55145	182 aa	Known RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	C21orf58	P58505	322 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	ETF1	P62495	437 aa	Known RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	CD226	Q15762	336 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	ETFDH	Q16134	617 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	DUSP5	Q16690	384 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	CHRFAM7A	Q494W8	412 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	TFAP2E	Q6VUC0	442 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	FCRLA	Q7L513	359 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	TRABD2A	Q86V40	505 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	BANP	Q8N9N5	519 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	CEP70	Q8NHQ1	597 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	B4GALNT2	Q8NHY0	566 aa		10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	PIWIL2	Q8TC59	973 aa	Known RBP	10.1	□□□□□ -0.79
COPG1-208	ENST00000513965	PHOSPHO1	Q8TCT1	267 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms