RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KLHL7Q8IXQ5 586 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 LILRA2Q8N149 483 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 SGMS2Q8NHU3 365 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 POC1BQ8TC44 478 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 ACTRT2Q8TDY3 377 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 SELENOMQ8WWX9 145 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 SLC9A6Q92581 669 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 REXO5Q96IC2 774 aaKnown RBP9.66□□□□□ -0.86
DDX41-216ENST00000513562 GPR78Q96P69 363 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 C12orf65Q9H3J6 166 aaKnown RBP9.66□□□□□ -0.86
DDX41-216ENST00000513562 BCO1Q9HAY6 547 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 HHATLQ9HCP6 504 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 NMRK1Q9NWW6 199 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 POU2F3Q9UKI9 436 aa9.66□□□□□ -0.86
DDX41-216ENST00000513562 C19orf53Q9UNZ5 99 aaPredicted RBP9.66□□□□□ -0.86
DDX41-216ENST00000513562 IGHV4-61A0A0C4DH41 118 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 OR5H1A6NKK0 313 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 ALG1L2C9J202 215 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 STX16-NPEPL1H3BU86 382 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 UPK1AO00322 258 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 STX16O14662 325 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 LY6HO94772 140 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PRKD3O94806 890 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 KLHL2O95198 593 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PGM3O95394 542 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 IGKV1D-16P01601 117 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 C2P06681 752 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 NGFRP08138 427 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 DHRS4L1P0CG22 281 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 GGT1P19440 569 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 ELK4P28324 431 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 SFTPDP35247 375 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PDLIM4P50479 330 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 ZNF41P51814 821 aaPredicted RBP9.65□□□□□ -0.86
DDX41-216ENST00000513562 MANFP55145 182 aaKnown RBP9.65□□□□□ -0.86
DDX41-216ENST00000513562 RAE1P78406 368 aaKnown RBP9.65□□□□□ -0.86
DDX41-216ENST00000513562 HEPACAMQ14CZ8 416 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 ZNHIT3Q15649 155 aaPredicted RBP9.65□□□□□ -0.86
DDX41-216ENST00000513562 TECRLQ5HYJ1 363 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 LETMD1Q6P1Q0 360 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 SLC22A25Q6T423 547 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 TMEM107Q6UX40 140 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 C3orf62Q6ZUJ4 267 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 FCRLAQ7L513 359 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 OR2L13Q8N349 312 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PPM1NQ8N819 430 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PHF21BQ96EK2 531 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PIMREGQ9BSJ6 248 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 LMF2Q9BU23 707 aaKnown RBP9.65□□□□□ -0.86
DDX41-216ENST00000513562 TIGARQ9NQ88 270 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 VPS29Q9UBQ0 182 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PRSS50Q9UI38 385 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 ING1Q9UK53 422 aaPredicted RBP9.65□□□□□ -0.86
DDX41-216ENST00000513562 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 PRR14LQ5THK1 2151 aa9.65□□□□□ -0.86
DDX41-216ENST00000513562 ESYT3A0FGR9 886 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 GXYLT2A0PJZ3 443 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 MYO1GB0I1T2 1018 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 EIF3HO15372 352 aaKnown RBP eCLIP9.64□□□□□ -0.87
DDX41-216ENST00000513562 NDUFB5O43674 189 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 PCDH7O60245 1069 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 KCNH1O95259 989 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 OXSR1O95747 527 aaPredicted RBP9.64□□□□□ -0.87
DDX41-216ENST00000513562 TGFAP01135 160 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 GSTA2P09210 222 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 LINGO3P0C6S8 592 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 BMP4P12644 408 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 IGHV1-2P23083 117 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 EDNRAP25101 427 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 PTAFRP25105 342 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 CD40P25942 277 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 COMPP49747 757 aaPredicted RBP9.64□□□□□ -0.87
DDX41-216ENST00000513562 SLC18A2Q05940 514 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 TCHHL1Q5QJ38 904 aaPredicted RBP9.64□□□□□ -0.87
DDX41-216ENST00000513562 FAM219BQ5XKK7 198 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 KLC3Q6P597 504 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 SLC35F6Q8N357 371 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 SLC43A2Q8N370 569 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 CDYL2Q8N8U2 506 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 OR4C3Q8NH37 302 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 OR2W6PQ8NHA6 318 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 ZFAND2BQ8WV99 257 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 BBS4Q96RK4 519 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 PSD2Q9BQI7 771 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 INPP5KQ9BT40 448 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 CXorf36Q9H7Y0 433 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 COQ10BQ9H8M1 238 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 C3orf14Q9HBI5 128 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 DDX18Q9NVP1 670 aaKnown RBP9.64□□□□□ -0.87
DDX41-216ENST00000513562 KLHL9Q9P2J3 617 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 SNX6Q9UNH7 406 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 SNX24Q9Y343 169 aa9.64□□□□□ -0.87
DDX41-216ENST00000513562 A0A096LPK6 155 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 GNG14A0A1W2PPG7 69 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 HMX2A2RU54 273 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 PPP6CO00743 305 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 SMAD9O15198 467 aaKnown RBP9.63□□□□□ -0.87
DDX41-216ENST00000513562 RGS14O43566 566 aa9.63□□□□□ -0.87
DDX41-216ENST00000513562 OTCP00480 354 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms