RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 YES1P07947 543 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 MTHFD2P13995 350 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 ME2P23368 584 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 PTAFRP25105 342 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 STX2P32856 288 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 SRP14P37108 136 aaKnown RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 PIK3CGP48736 1102 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 FABP6P51161 128 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 PSMD4P55036 377 aaKnown RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 TRA2BP62995 288 aaKnown RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 PSG6Q00889 435 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 SLC29A2Q14542 456 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 STK11Q15831 433 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 DECR1Q16698 335 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 CPTPQ5TA50 214 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 FRG2Q64ET8 278 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 ZNF544Q6NX49 715 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 FAM180BQ6P0A1 224 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 METTL2BQ6P1Q9 378 aaKnown RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 SLC22A25Q6T423 547 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 Q6ZT83 130 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 TRMT10CQ7L0Y3 403 aaKnown RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 COMMD6Q7Z4G1 85 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 MARCH3Q86UD3 253 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 TUSC5Q8IXB3 177 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 GTPBP8Q8N3Z3 284 aaPredicted RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 ZNF540Q8NDQ6 660 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 RHEBL1Q8TAI7 183 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 RNF128Q8TEB7 428 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 KAT2AQ92830 837 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 ZBTB8AQ96BR9 441 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 FRG2BQ96QU4 278 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 UTS2RQ9UKP6 389 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 VDAC3Q9Y277 283 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 TNPO3Q9Y5L0 923 aaKnown RBP10.23□□□□□ -0.77
RNF4-216ENST00000511859 A0A087WUV0 522 aaPredicted RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 A0A0G2JK05 382 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 A0A0J9YW62 118 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 CCDC189A1A4V9 331 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 C7orf72A4D263 438 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 NME6O75414 186 aaPredicted RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 PRKD3O94806 890 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 PGM3O95394 542 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 ANGPTL1O95841 491 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 ALDH9A1P49189 494 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 ALDH18A1P54886 795 aaKnown RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 PRR5P85299 388 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 CSTF3Q12996 717 aaKnown RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 IFT88Q13099 833 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 TTC19Q6DKK2 380 aaPredicted RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 GOLGA7Q7Z5G4 137 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 ABHD3Q8WU67 409 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNF4-216ENST00000511859 CDKL2Q92772 493 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 ATP6V1E2Q96A05 226 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 CPNE4Q96A23 557 aaPredicted RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 MTBPQ96DY7 904 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 RBBP8Q99708 897 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 CPNE1Q99829 537 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 TBL1XR1Q9BZK7 514 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 BHLHE41Q9C0J9 482 aaPredicted RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 PFDN4Q9NQP4 134 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 TMEFF2Q9UIK5 374 aaPredicted RBP10.22□□□□□ -0.77
RNF4-216ENST00000511859 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
RNF4-216ENST00000511859 NOTCH1P46531 2555 aa10.21□□□□□ -0.77
RNF4-216ENST00000511859 LOC390937A0A1W2PQ73 354 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 SERINC4A6NH21 518 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 LYZL6O75951 148 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 IL33O95760 270 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 OPN1LWP04000 364 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 SHBGP04278 402 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 LTA4HP09960 611 aaKnown RBP10.21□□□□□ -0.78
RNF4-216ENST00000511859 DHRS4L1P0CG22 281 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 GFAPP14136 432 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 ZNF23P17027 643 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 GGT1P19440 569 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 PSMA4P25789 261 aaKnown RBP10.21□□□□□ -0.78
RNF4-216ENST00000511859 MPIP34949 423 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 HSD17B3P37058 310 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 DLG1Q12959 904 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 ZNF239Q16600 458 aaKnown RBP10.21□□□□□ -0.78
RNF4-216ENST00000511859 PFKFB4Q16877 469 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 IQCCQ4KMZ1 466 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 TCHHL1Q5QJ38 904 aaPredicted RBP10.21□□□□□ -0.78
RNF4-216ENST00000511859 SH2D4BQ5SQS7 431 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 EMBQ6PCB8 327 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 KLHL17Q6TDP4 642 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 RAPH1Q70E73 1250 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 TRABD2AQ86V40 505 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 SLC43A2Q8N370 569 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 OR9A2Q8NGT5 310 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 OR2W6PQ8NHA6 318 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 ACTRT2Q8TDY3 377 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 GCDHQ92947 438 aaPredicted RBP10.21□□□□□ -0.78
RNF4-216ENST00000511859 C3orf49Q96BT1 292 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 INPP5KQ9BT40 448 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 OCEL1Q9H607 264 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 ACSS3Q9H6R3 686 aa10.21□□□□□ -0.78
RNF4-216ENST00000511859 MYOZ1Q9NP98 299 aaPredicted RBP10.21□□□□□ -0.78
RNF4-216ENST00000511859 NMRK1Q9NWW6 199 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms