RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, human

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-215	ENST00000511843	SLC35G5	Q96KT7	338 aa		11.99	□□□□□ -0.49
RNF4-215	ENST00000511843	OR51I1	Q9H343	314 aa		11.99	□□□□□ -0.49
RNF4-215	ENST00000511843	UBQLN4	Q9NRR5	601 aa		11.99	□□□□□ -0.49
RNF4-215	ENST00000511843	L3MBTL1	Q9Y468	752 aa		11.99	□□□□□ -0.49
RNF4-215	ENST00000511843	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF4-215	ENST00000511843	CENPVL1	A0A0U1RR11	272 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843		E9PBE3	544 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	HCRTR2	O43614	444 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	TNFRSF21	O75509	655 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PEPD	P12955	493 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	SLC18A1	P54219	525 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF117	Q03924	483 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PLPPR5	Q32ZL2	321 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	FLYWCH1	Q4VC44	716 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	AGBL2	Q5U5Z8	902 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	CBLN3	Q6UW01	205 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	CHMP1B	Q7LBR1	199 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	P4HA3	Q7Z4N8	544 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	LUZP2	Q86TE4	346 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	LSR	Q86X29	649 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	ZZZ3	Q8IYH5	903 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	KIRREL3	Q8IZU9	778 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	MEIOB	Q8N635	442 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PHOSPHO1	Q8TCT1	267 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF75CP	Q92670	426 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	RAB8B	Q92930	207 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	WNT2B	Q93097	391 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	TESC	Q96BS2	214 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	MOAP1	Q96BY2	351 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	C14orf79	Q96F83	325 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF559	Q9BR84	538 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PIGQ	Q9BRB3	760 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	INPP5K	Q9BT40	448 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PINK1	Q9BXM7	581 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	TMEM185B	Q9H7F4	350 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	MED17	Q9NVC6	651 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PCDHGB4	Q9UN71	923 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	GPR45	Q9Y5Y3	372 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	POLQ	O75417	2590 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	CREBBP	Q92793	2442 aa		11.98	□□□□□ -0.49
RNF4-215	ENST00000511843	PRSS51	A0A1B0GVH4	220 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843		A0A1W2PQD3	144 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	SLC22A20	A6NK97	555 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	TRPC5OS	A6NMA1	111 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	SYT5	O00445	386 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	FCMR	O60667	390 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	RCBTB2	O95199	551 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	KRT16	P08779	473 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	OR12D1	P0DN82	309 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	IL11	P20809	199 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	LCN1	P31025	176 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	S100A3	P33764	101 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	CDKN2C	P42773	168 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF41	P51814	821 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	CLNS1A	P54105	237 aa	Known RBP	11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	GPR68	Q15743	365 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	BCL2A1	Q16548	175 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	TMEM44	Q2T9K0	475 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	KLHL26	Q53HC5	615 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	PPP4R4	Q6NUP7	873 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	SPATA19	Q7Z5L4	167 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	HMGN2P46	Q86SG4	172 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	GGN	Q86UU5	652 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	B4GALNT2	Q8NHY0	566 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	RFWD2	Q8NHY2	731 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	FNDC9	Q8TBE3	224 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	RAB3IL1	Q8TBN0	382 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	POC1B	Q8TC44	478 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	RNASE6	Q93091	150 aa	Known RBP	11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF524	Q96C55	264 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	RNF145	Q96MT1	663 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	OR52B2	Q96RD2	323 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	UCN2	Q96RP3	112 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	SDF2	Q99470	211 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	TM9SF2	Q99805	663 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	SLC35A5	Q9BS91	424 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	MCCC2	Q9HCC0	563 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	CRIM1	Q9NZV1	1036 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	KCNE5	Q9UJ90	142 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	CARD8	Q9Y2G2	431 aa		11.97	□□□□□ -0.49
RNF4-215	ENST00000511843	NPIPB9	F8W1W9	429 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	EIF1AY	O14602	144 aa	Known RBP	11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	ZNF195	O14628	629 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	GSN	P06396	782 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	UQCRC2	P22695	453 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	SHC1	P29353	583 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	OPRM1	P35372	400 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	CHI3L1	P36222	383 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	KIR2DL3	P43628	341 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	SLC6A8	P48029	635 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	ATP12A	P54707	1039 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	SIRPA	P78324	504 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	FUT5	Q11128	374 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	FOXF1	Q12946	379 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	PON3	Q15166	354 aa		11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	TOMM34	Q15785	309 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	GLYR1	Q49A26	553 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF4-215	ENST00000511843	PDZK1	Q5T2W1	519 aa		11.96	□□□□□ -0.49

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