RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 B4DXG7 233 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 NPIPA7E9PJI5 369 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 LINC01387J3KSC0 135 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 GTPBP1O00178 669 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 HCRTR2O43614 444 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 GMFGO60234 142 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 KIAA0513O60268 411 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 HNRNPCL1O60812 293 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ZG16O60844 167 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 WDR1O75083 606 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 DNAJC8O75937 253 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 H6PDO95479 791 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SNRPB2P08579 225 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 NPIPA8P0DM63 369 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 NR2F1P10589 423 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ETFAP13804 333 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 HK1P19367 917 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PPIBP23284 216 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CHMP24386 653 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ACVR2AP27037 513 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ADSLP30566 484 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PTGER4P35408 488 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CRATP43155 626 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 RASSF2P50749 326 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SMSP52788 366 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 MVDP53602 400 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 GFRA1P56159 465 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 DSTNP60981 165 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 NCALDP61601 193 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 HPCAP84074 193 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CRYZQ08257 329 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 BNIP1Q12981 228 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SF3B4Q15427 424 aaKnown RBP eCLIP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CD226Q15762 336 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ZNF141Q15928 474 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SYPL1Q16563 259 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ZNF630Q2M218 657 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 GLYR1Q49A26 553 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 GTDC1Q4AE62 458 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 EMC4Q5J8M3 183 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PAGE3Q5JUK9 113 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PDZK1Q5T2W1 519 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 LRIF1Q5T3J3 769 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 XKRXQ6PP77 449 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ENPP6Q6UWR7 440 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 RPTNQ6XPR3 784 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ZNF619Q8N2I2 560 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ZNF614Q8N883 585 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PHF10Q8WUB8 498 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PMM1Q92871 262 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 C1GALT1C1Q96EU7 318 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 AURKBQ96GD4 344 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CCDC120Q96HB5 630 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SFXN2Q96NB2 322 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PSMG3-AS1Q96PY0 264 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 TRNT1Q96Q11 434 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 DMRTA2Q96SC8 542 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PIGQQ9BRB3 760 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 UGT2B28Q9BY64 529 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SAP130Q9H0E3 1048 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 RAD21L1Q9H4I0 556 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 MTHFD2LQ9H903 347 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 SAR1AQ9NR31 198 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 ALKBH4Q9NXW9 302 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CALML5Q9NZT1 146 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 P2RX2Q9UBL9 471 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 RPH3AQ9Y2J0 694 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 NDUFAF1Q9Y375 327 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 CAPN7Q9Y6W3 813 aa6.49□□□□□ -1.37
PDLIM5-215ENST00000511586 PRRC2CQ9Y520 2896 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 UBR5O95071 2799 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 PRAMEF27A3QJZ7 478 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CFAP73A6NFT4 308 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 SERINC4A6NH21 518 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 EVPLLA8MZ36 301 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 FAM47E-STBD1D6RA91 191 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 ANGPT2O15123 496 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 ZNF264O43296 627 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 EIF4E2O60573 245 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 UGT2B17O75795 530 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CSTAP01040 98 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CHRM4P08173 479 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 TFPTP0C1Z6 253 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 RNF224P0DH78 156 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 UBL4AP11441 157 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CPN1P15169 458 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CD1EP15812 388 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 HOXB9P17482 250 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 AGAP20933 346 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CALB2P22676 271 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 TCEA1P23193 301 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 ADH7P40394 386 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 P2RX1P51575 399 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 ZNF41P51814 821 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 CRISP3P54108 245 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 SUMO3P55854 103 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 B3GALT5-AS1P59052 145 aa6.48□□□□□ -1.37
PDLIM5-215ENST00000511586 ADORA2A-AS1P86434 159 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms