RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 E9PQ18 207 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 EEF2KO00418 725 aaKnown RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 RASGRF2O14827 1237 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 HS6ST1O60243 411 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 CDC40O60508 579 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP53-206ENST00000510737 CLPTM1O96005 669 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 POLBP06746 335 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 LIPFP07098 398 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 ICAM2P13598 275 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 UGT2B7P16662 529 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 ZNF182P17025 639 aaPredicted RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 ZNF24P17028 368 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 GATA2P23769 480 aaPredicted RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 CNTFP26441 200 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 PBLDP30039 288 aaPredicted RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 PEX19P40855 299 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 RFC3P40938 356 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 BMXP51813 675 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 EFNA3P52797 238 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 EMP2P54851 167 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TNK1Q13470 666 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 GPR68Q15743 365 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 SLC25A35Q3KQZ1 300 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 CCDC40Q4G0X9 1142 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 MARC1Q5VT66 337 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TAF3Q5VWG9 929 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 NAA35Q5VZE5 725 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 PDPK2PQ6A1A2 396 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TRIM65Q6PJ69 517 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 SPESP1Q6UW49 350 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 KDELC1Q6UW63 502 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 PACS1Q6VY07 963 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 AMIGO1Q86WK6 493 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TEX26Q8N6G2 289 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TMEM178AQ8NBL3 297 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 LPCAT1Q8NF37 534 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 OR52E1Q8NGJ3 308 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 FGFBP3Q8TAT2 258 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 NAT14Q8WUY8 206 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 SLCO2A1Q92959 643 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP53-206ENST00000510737 GMPPAQ96IJ6 420 aaPredicted RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 RMDN2Q96LZ7 410 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 ZNF396Q96N95 335 aaPredicted RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 VPS35Q96QK1 796 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 UTP23Q9BRU9 249 aaKnown RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 NT5MQ9NPB1 228 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 CCDC177Q9NQR7 707 aaPredicted RBP5.43□□□□□ -1.54
USP53-206ENST00000510737 PNPLA3Q9NST1 481 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 CUTCQ9NTM9 273 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 SPHK1Q9NYA1 384 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 TEKT2Q9UIF3 430 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 DNPEPQ9ULA0 475 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 FAM215AQ9Y5M1 114 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 MGAM2Q2M2H8 2515 aa5.43□□□□□ -1.54
USP53-206ENST00000510737 IGLV3-12A0A075B6K2 115 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 TUBAL3A6NHL2 446 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 OR2AG2A6NM03 316 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 EIF3CLB5ME19 914 aaKnown RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 TLX2O43763 284 aaPredicted RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 UGT1A9O60656 530 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 STATHP02808 62 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 KRT3P12035 628 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 UGT1A6P19224 532 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 CXCR2P25025 360 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 STX17P56962 302 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 DCDC1P59894 354 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 RPL26P61254 145 aaKnown RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 DEFA6Q01524 100 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 LRRC63Q05C16 580 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 NIPAL4Q0D2K0 466 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 CUL4AQ13619 759 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 KRT33BQ14525 404 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 MESDQ14696 234 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 UNC5DQ6UXZ4 953 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 NLRP9Q7RTR0 991 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 P2RY8Q86VZ1 359 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 CRLF3Q8IUI8 442 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 FAM71AQ8IYT1 594 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 PPHLN1Q8NEY8 458 aaKnown RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 OR5M9Q8NGP3 310 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 BRSK1Q8TDC3 778 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 RNASE6Q93091 150 aaKnown RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 FAM81BQ96LP2 452 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 TTC25Q96NG3 672 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 TUBGCP2Q9BSJ2 902 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 THAP2Q9H0W7 228 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 DEFB127Q9H1M4 99 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 PELI2Q9HAT8 420 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 UGT1A7Q9HAW7 530 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 UGT1A10Q9HAW8 530 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 UGT1A8Q9HAW9 530 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 STOX2Q9P2F5 926 aaPredicted RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 KLHL8Q9P2G9 620 aaPredicted RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 NFKBIL1Q9UBC1 381 aaPredicted RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 ZNF282Q9UDV7 671 aaPredicted RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 DNAJC12Q9UKB3 198 aa5.42□□□□□ -1.54
USP53-206ENST00000510737 RPL26L1Q9UNX3 145 aaKnown RBP5.42□□□□□ -1.54
USP53-206ENST00000510737 CPAMD8Q8IZJ3 1885 aa5.41□□□□□ -1.54
USP53-206ENST00000510737 IGHV3-20A0A0C4DH32 117 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms