RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TOMM34Q15785 309 aaPredicted RBP14.17□□□□□ -0.14
RAB40C-202ENST00000509637 GLE1Q53GS7 698 aaKnown RBP14.17□□□□□ -0.14
RAB40C-202ENST00000509637 CPTPQ5TA50 214 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 ZYG11AQ6WRX3 759 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 SLC22A9Q8IVM8 553 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 TMEM171Q8WVE6 324 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 S100PBPQ96BU1 408 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 DTNBP1Q96EV8 351 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 PRRG4Q9BZD6 226 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 EMC9Q9Y3B6 208 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 KCNE3Q9Y6H6 103 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 C7orf72A4D263 438 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 DPRXA6NFQ7 191 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 ZNF814B7Z6K7 855 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 NDUFB5O43674 189 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 RSL1D1O76021 490 aaKnown RBP14.16□□□□□ -0.14
RAB40C-202ENST00000509637 SLITRK5O94991 958 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 CD8AP01732 235 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 NGFRP08138 427 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 IFI6P09912 130 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 ZNF17P17021 662 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 NTSP30990 170 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 CTBP2P56545 445 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 TAB1Q15750 504 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 NDUFAF6Q330K2 333 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 NCMAPQ5T1S8 102 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 ALKBH2Q6NS38 261 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 CBLN3Q6UW01 205 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 TFAP2EQ6VUC0 442 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 DNM1P46Q6ZS02 220 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 FRMD7Q6ZUT3 714 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 WDR75Q8IWA0 830 aaKnown RBP14.16□□□□□ -0.14
RAB40C-202ENST00000509637 TUSC5Q8IXB3 177 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 ZNF619Q8N2I2 560 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 CEP112Q8N8E3 955 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 LRRN4CLQ8ND94 238 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 NUP43Q8NFH3 380 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 CLHC1Q8NHS4 586 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 SPATA3Q8NHX4 192 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 FAM76AQ8TAV0 307 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 COQ10BQ9H8M1 238 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 TBK1Q9UHD2 729 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 GPR52Q9Y2T5 361 aa14.16□□□□□ -0.14
RAB40C-202ENST00000509637 SEC22BO75396 215 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 FCGR2AP12318 317 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 PPP3CBP16298 524 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 SDC1P18827 310 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 PRPH2P23942 346 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 SFTPDP35247 375 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 CDKN1AP38936 164 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 MANFP55145 182 aaKnown RBP14.15□□□□□ -0.14
RAB40C-202ENST00000509637 PPP2R2BQ00005 443 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 FOXF1Q12946 379 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 PDE7AQ13946 482 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 WHAMMP3Q1A5X7 153 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 PGGHGQ32M88 737 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 RFTN2Q52LD8 501 aaPredicted RBP14.15□□□□□ -0.14
RAB40C-202ENST00000509637 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.14
RAB40C-202ENST00000509637 HBMQ6B0K9 141 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 ADAM5Q6NVV9 412 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 BEND4Q6ZU67 534 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 RNF128Q8TEB7 428 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 TSSK3Q96PN8 268 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 GIMAP2Q9UG22 337 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 CUBNO60494 3623 aa14.15□□□□□ -0.14
RAB40C-202ENST00000509637 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 A0A087WZY1 265 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 PDPK1O15530 556 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 TBX19O60806 448 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 KCNH1O95259 989 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 PLGP00747 810 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 IGHV4-39P01824 125 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 PTNP21246 168 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ENPP1P22413 925 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ACVR1BP36896 505 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 CLK3P49761 638 aaKnown RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ZNF117Q03924 483 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ZNHIT3Q15649 155 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ZNF239Q16600 458 aaKnown RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 IMPG1Q17R60 797 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 CLEC12BQ2HXU8 276 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ESPNLQ6ZVH7 1005 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 IKBIPQ70UQ0 350 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 TRABD2AQ86V40 505 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 LILRA2Q8N149 483 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 CDRT4Q8N9R6 151 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ACMSDQ8TDX5 336 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ACTRT2Q8TDY3 377 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 KLHL15Q96M94 604 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 C16orf45Q96MC5 204 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 REG4Q9BYZ8 158 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 TSPYL1Q9H0U9 437 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 OR10A4Q9H209 315 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 REEP4Q9H6H4 257 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 CXorf36Q9H7Y0 433 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 ANKZF1Q9H8Y5 726 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 GDF2Q9UK05 429 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 MRTO4Q9UKD2 239 aaKnown RBP14.14□□□□□ -0.15
RAB40C-202ENST00000509637 STK38LQ9Y2H1 464 aa14.14□□□□□ -0.15
RAB40C-202ENST00000509637 WBP11Q9Y2W2 641 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms