RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SAGP10523 405 aaPredicted RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 GLB1P16278 677 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 MAKP20794 623 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 ACVR2AP27037 513 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 GPR3P46089 330 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 ARRB1P49407 418 aaPredicted RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 CSTF1Q05048 431 aaKnown RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 COX10Q12887 443 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 UBE2UQ5VVX9 321 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 PLAG1Q6DJT9 500 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 OR51A7Q8NH64 312 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 LGALS12Q96DT0 336 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 SATB2Q9UPW6 733 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 NCOR1O75376 2440 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 TRAV27A0A087WT01 109 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 A0A1W2PPC1 479 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 EFCAB10A6NFE3 127 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 MPZL2O60487 215 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 OR5F1O95221 314 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 CT45A8P0DMV1 189 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 CT45A9P0DMV2 189 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 IFNGR2P38484 337 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 MAP3K8P41279 467 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 CCR4P51679 360 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 CT45A2Q5DJT8 189 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 MBOAT2Q6ZWT7 520 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 PLXDC1Q8IUK5 500 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 ALDH16A1Q8IZ83 802 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 HSPBAP1Q96EW2 488 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 SENP5Q96HI0 755 aaPredicted RBP13.76□□□□□ -0.21
PHF3-209ENST00000509330 SLC7A5P2Q9GIP4 190 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 UCK1Q9HA47 277 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 Q9N2J8 555 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 ZC3H12DA2A288 527 aaKnown RBP13.76□□□□□ -0.21
PHF3-209ENST00000509330 TRAPPC13A5PLN9 417 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 LRRN3E7EW58 273 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 RFPL3O75679 317 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 THBS1P07996 1170 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 DCTN2Q13561 401 aaKnown RBP13.76□□□□□ -0.21
PHF3-209ENST00000509330 OR13C2Q8NGS9 318 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 TMEM239Q8WW34 195 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 ZNF582Q96NG8 517 aaPredicted RBP13.76□□□□□ -0.21
PHF3-209ENST00000509330 LRRN3Q9H3W5 708 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 MED20Q9H944 212 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 FGF21Q9NSA1 209 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 CORINQ9Y5Q5 1042 aa13.76□□□□□ -0.21
PHF3-209ENST00000509330 IGHV3-20A0A0C4DH32 117 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 PRAMEF2O60811 474 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 GSTM3P21266 225 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 RPS4Y1P22090 263 aaKnown RBP13.75□□□□□ -0.21
PHF3-209ENST00000509330 GCGRP47871 477 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 CDK5Q00535 292 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 ARHGAP40Q5TG30 622 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 BTLAQ7Z6A9 289 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 ZHX1-C8orf76Q96EF9 292 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 PLEKHA8Q96JA3 519 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 MGLLQ99685 303 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 NDC1Q9BTX1 674 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 CENPOQ9BU64 300 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 SLC25A19Q9HC21 320 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 EXOSC4Q9NPD3 245 aaKnown RBP13.75□□□□□ -0.21
PHF3-209ENST00000509330 PRDM9Q9NQV7 894 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 BMXP51813 675 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 SNRPGP62308 76 aaKnown RBP13.75□□□□□ -0.21
PHF3-209ENST00000509330 NR1D2Q14995 579 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 DECR1Q16698 335 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 GXYLT1Q4G148 440 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 EXOSC6Q5RKV6 272 aaKnown RBP13.75□□□□□ -0.21
PHF3-209ENST00000509330 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 ADCK1Q86TW2 530 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 GHDCQ8N2G8 530 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 SLC15A4Q8N697 577 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 ZNF285Q96NJ3 590 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 CTSFQ9UBX1 484 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 CBLCQ9ULV8 474 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 GPR179Q6PRD1 2367 aa13.75□□□□□ -0.21
PHF3-209ENST00000509330 SH3D21A4FU49 640 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 CLPXO76031 633 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 OPRL1P41146 370 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 PTPMT1Q8WUK0 201 aaPredicted RBP13.74□□□□□ -0.21
PHF3-209ENST00000509330 Q96MT0 163 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 LANCL2Q9NS86 450 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 MKL2Q9ULH7 1088 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 CLCA3PQ9Y6N3 262 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 A0A1B0GWA3 101 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 GDF9O60383 454 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 EMP3P54852 163 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 HSD17B7P56937 341 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 NSDHLQ15738 373 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 OR2G6Q5TZ20 316 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 GARNL3Q5VVW2 1013 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 ZCCHC12Q6PEW1 402 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 ZNF620Q6ZNG0 422 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 RASSF6Q6ZTQ3 369 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
PHF3-209ENST00000509330 POLDIP3Q9BY77 421 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms