RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 POMZP3Q6PJE2 187 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 WDR75Q8IWA0 830 aaKnown RBP16.84■□□□□ 0.29
UBE3D-207ENST00000509102 OR5M1Q8NGP8 315 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 B4GALNT2Q8NHY0 566 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 PHOSPHO1Q8TCT1 267 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 FAM222BQ8WU58 562 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 SH3YL1Q96HL8 342 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-207ENST00000509102 PINK1Q9BXM7 581 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 PNPOQ9NVS9 261 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 GPATCH2Q9NW75 528 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 PACSIN3Q9UKS6 424 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 ZNF175Q9Y473 711 aa16.84■□□□□ 0.29
UBE3D-207ENST00000509102 RNF103-CHMP3A0A140T963 221 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 PRSS51A0A1B0GVH4 220 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 NUDT14O95848 222 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 AGR2O95994 175 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 MATN1P21941 496 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 OCRLQ01968 901 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 FOXF2Q12947 444 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 FGFBP1Q14512 234 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 FBXW10Q5XX13 1052 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 LUZP2Q86TE4 346 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 TESCQ96BS2 214 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 SLC35G5Q96KT7 338 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 OR7D2Q96RA2 312 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 RBM24Q9BX46 236 aaKnown RBP16.83■□□□□ 0.28
UBE3D-207ENST00000509102 EXD2Q9NVH0 621 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 FBXO34Q9NWN3 711 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 PAQR5Q9NXK6 330 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-207ENST00000509102 CRIM1Q9NZV1 1036 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 EDARQ9UNE0 448 aa16.83■□□□□ 0.28
UBE3D-207ENST00000509102 ANKHD1Q8IWZ3 2542 aaKnown RBP16.83■□□□□ 0.28
UBE3D-207ENST00000509102 DOCK7Q96N67 2140 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 GTPBP1O00178 669 aaKnown RBP16.82■□□□□ 0.28
UBE3D-207ENST00000509102 HDAC3O15379 428 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 EIF1P41567 113 aaKnown RBP16.82■□□□□ 0.28
UBE3D-207ENST00000509102 KRTAP10-9P60411 292 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 SNTB1Q13884 538 aaKnown RBP16.82■□□□□ 0.28
UBE3D-207ENST00000509102 BEND6Q5SZJ8 279 aaPredicted RBP16.82■□□□□ 0.28
UBE3D-207ENST00000509102 PDSS1Q5T2R2 415 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 ATAD3BQ5T9A4 648 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 OGFOD2Q6N063 350 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 PPP4R4Q6NUP7 873 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 C6orf120Q7Z4R8 191 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 SPATA19Q7Z5L4 167 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 ZAR1Q86SH2 424 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 CLECL1Q8IZS7 167 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 GTPBP8Q8N3Z3 284 aaPredicted RBP16.82■□□□□ 0.28
UBE3D-207ENST00000509102 ZNF614Q8N883 585 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 CNEP1R1Q8N9A8 125 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 NUDT8Q8WV74 236 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 ZBTB18Q99592 522 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 PRRG4Q9BZD6 226 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 MED17Q9NVC6 651 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 JKAMPQ9P055 326 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 ITGB1BP2Q9UKP3 347 aa16.82■□□□□ 0.28
UBE3D-207ENST00000509102 A0A1W2PNV4 684 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 C7orf72A4D263 438 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 E9PBE3 544 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 EIF1AYO14602 144 aaKnown RBP16.81■□□□□ 0.28
UBE3D-207ENST00000509102 TGM6O95932 706 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 UQCRC2P22695 453 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 S100A3P33764 101 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 EIF1AXP47813 144 aaKnown RBP16.81■□□□□ 0.28
UBE3D-207ENST00000509102 ATP12AP54707 1039 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 SUMO3P55854 103 aaPredicted RBP16.81■□□□□ 0.28
UBE3D-207ENST00000509102 CLDN15P56746 228 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 CLDN20P56880 219 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 WDR4P57081 412 aaKnown RBP16.81■□□□□ 0.28
UBE3D-207ENST00000509102 PON3Q15166 354 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 PLXDC2Q6UX71 529 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 C16orf62Q7Z3J2 963 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 METTL25Q8N6Q8 603 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 TRIML2Q8N7C3 387 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 MANSC1Q9H8J5 431 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 TMBIM4Q9HC24 238 aa16.81■□□□□ 0.28
UBE3D-207ENST00000509102 DNAJB12Q9NXW2 375 aaKnown RBP16.81■□□□□ 0.28
UBE3D-207ENST00000509102 KIAA1549Q9HCM3 1950 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 ANKRD17O75179 2603 aaKnown RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 SHISA8B8ZZ34 492 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 STX11O75558 287 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 SMNDC1O75940 238 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 SYNGR4O95473 234 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 CPSF4O95639 269 aaKnown RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 KITP10721 976 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 CHI3L1P36222 383 aaPredicted RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 CPOXP36551 454 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 SUCLG1P53597 346 aaKnown RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 RPS26P62854 115 aaKnown RBP16.8■□□□□ 0.28
UBE3D-207ENST00000509102 RAC1P63000 192 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 LRRC74AQ0VAA2 488 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 CD226Q15762 336 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 TMEM44Q2T9K0 475 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 PLPPR5Q32ZL2 321 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 FAM174BQ3ZCQ3 159 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 KLHL26Q53HC5 615 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 ANKRD46Q86W74 232 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 OR5D16Q8NGK9 328 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
UBE3D-207ENST00000509102 POLDIP3Q9BY77 421 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms