RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PRPS1L1P21108 318 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 ELK4P28324 431 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 ALDH3A1P30838 453 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 EIF1AXP47813 144 aaKnown RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 SUMO3P55854 103 aaPredicted RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 SIRPAP78324 504 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 FOXD4Q12950 439 aaPredicted RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 GUSBP1Q15486 140 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 SMU1Q2TAY7 513 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 ARL13AQ5H913 290 aaPredicted RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 ANKRD26P1Q6NSI1 321 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 ZNF474Q6S9Z5 364 aaPredicted RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 BEND4Q6ZU67 534 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 GGNQ86UU5 652 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 SLC16A11Q8NCK7 471 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 OR2T11Q8NH01 316 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 OR4C3Q8NH37 302 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 B4GALNT2Q8NHY0 566 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 PSMA8Q8TAA3 256 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 SFXN5Q8TD22 340 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 JADE3Q92613 823 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 REXO5Q96IC2 774 aaKnown RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 WFIKKN1Q96NZ8 548 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 ACTRT3Q9BYD9 372 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 RTN4RQ9BZR6 473 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 TUBB1Q9H4B7 451 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 GP6Q9HCN6 339 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 BAIAP2L1Q9UHR4 511 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 VDAC3Q9Y277 283 aa12.22□□□□□ -0.45
CCHCR1-227ENST00000508852 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 DUXAA6NLW8 204 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 PIP5K1BO14986 540 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 SMPD2O60906 423 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 IGKV1D-16P01601 117 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 HMGN2P05204 90 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 ACP2P11117 423 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 HOXC12P31275 282 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 NR1H2P55055 460 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 RNPS1Q15287 305 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 DUSP5Q16690 384 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 PLPPR5Q32ZL2 321 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 UGT3A2Q3SY77 523 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 ZNF385BQ569K4 471 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 EXOSC6Q5RKV6 272 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 CDC73Q6P1J9 531 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 FIGNL1Q6PIW4 674 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 PLXDC2Q6UX71 529 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 APOOLQ6UXV4 268 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 OR5M1Q8NGP8 315 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 OR10D3Q8NH80 312 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 ADAMTS15Q8TE58 950 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 FAM120BQ96EK7 910 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 CHMP6Q96FZ7 201 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 TACO1Q9BSH4 297 aaKnown RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 HDHD5Q9BXW7 423 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 BHLHE41Q9C0J9 482 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 OPN3Q9H1Y3 402 aaPredicted RBP12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 DLL4Q9NR61 685 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 MED17Q9NVC6 651 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 KLHL28Q9NXS3 571 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 SNX8Q9Y5X2 465 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 PTGDR2Q9Y5Y4 395 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 ACTL7BQ9Y614 415 aa12.21□□□□□ -0.45
CCHCR1-227ENST00000508852 C17orf51A8MQB3 221 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 AK1P00568 194 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 TUBBP07437 444 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 CCT3P49368 545 aaKnown RBP12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 CARD18P57730 90 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 POU4F3Q15319 338 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 ACKR1Q16570 336 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 SPDYE7PQ495Y7 208 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 XKR7Q5GH72 579 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 BEX5Q5H9J7 111 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 HBMQ6B0K9 141 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 PPP4R4Q6NUP7 873 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 EMBQ6PCB8 327 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 P3H2Q8IVL5 708 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 ZNF610Q8N9Z0 462 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 FNDC5Q8NAU1 212 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 CLHC1Q8NHS4 586 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 OIT3Q8WWZ8 545 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 CPNE4Q96A23 557 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 COQ8BQ96D53 544 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 ADGRG7Q96K78 797 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 C18orf12Q96KH6 178 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 C12orf65Q9H3J6 166 aaKnown RBP12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 GPR52Q9Y2T5 361 aa12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 GPC6Q9Y625 555 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 ZNF469Q96JG9 3925 aaPredicted RBP12.2□□□□□ -0.46
CCHCR1-227ENST00000508852 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
CCHCR1-227ENST00000508852 H0YC42 278 aa12.19□□□□□ -0.46
CCHCR1-227ENST00000508852 GTPBP1O00178 669 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-227ENST00000508852 PEX11AO75192 247 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms