RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 TXNL4AP83876 142 aaKnown RBP15.34■□□□□ 0.05
CLDND1-219ENST00000508659 GPR68Q15743 365 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 HSPB2Q16082 182 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 ARHGAP11BQ3KRB8 267 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 C6orf10Q5SRN2 563 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.34■□□□□ 0.05
CLDND1-219ENST00000508659 ARSKQ6UWY0 536 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 SEM1Q6ZVN7 128 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 UBQLNLQ8IYU4 475 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 MEIOBQ8N635 442 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 ARFGAP2Q8N6H7 521 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 OR5M1Q8NGP8 315 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 LILRB4Q8NHJ6 448 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 B4GALNT2Q8NHY0 566 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 ZPLD1Q8TCW7 415 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 XAGE5Q8WWM1 108 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 RAB8BQ92930 207 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 ZBTB8AQ96BR9 441 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 SDF2Q99470 211 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 NMUR2Q9GZQ4 415 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 GTF3C1Q12789 2109 aa15.34■□□□□ 0.05
CLDND1-219ENST00000508659 FAM234BA2RU67 622 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 OR2M5A3KFT3 312 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 NKX2-6A6NCS4 301 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 KDM4EB2RXH2 506 aaPredicted RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 SEC14L5O43304 696 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 HNRNPRO43390 633 aaKnown RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 KIAA0513O60268 411 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 TNFRSF21O75509 655 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 KRT75O95678 551 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 NUDT14O95848 222 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 IL2RAP01589 272 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 PEPDP12955 493 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 TIMP3P35625 211 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 MRPL19P49406 292 aaKnown RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF117Q03924 483 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 GLYR1Q49A26 553 aaPredicted RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 KLHL26Q53HC5 615 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 PDZK1Q5T2W1 519 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 SP5Q6BEB4 398 aaPredicted RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 HEPHL1Q6MZM0 1159 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 TMCO5AQ8N6Q1 288 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 PNPT1Q8TCS8 783 aaKnown RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 SMPDL3BQ92485 455 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 MARVELD3Q96A59 401 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 VPS33AQ96AX1 596 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 THOC1Q96FV9 657 aaKnown RBP15.33■□□□□ 0.04
CLDND1-219ENST00000508659 ITCHQ96J02 903 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 TUBA1CQ9BQE3 449 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 SIKE1Q9BRV8 207 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 NPHS2Q9NP85 383 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 KCNJ16Q9NPI9 418 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 POLE3Q9NRF9 147 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 DTNAQ9Y4J8 743 aa15.33■□□□□ 0.04
CLDND1-219ENST00000508659 MBD3L4A6NDZ8 208 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 MBD3L3A6NE82 208 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 MBD3L5A6NJ08 208 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 CLCA1A8K7I4 914 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 NPIPB9F8W1W9 429 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 C19orf84I3L1E1 186 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 GTPBP1O00178 669 aaKnown RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 NR5A2O00482 541 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 UBL4AP11441 157 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 CCR4P51679 360 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 SUMO3P55854 103 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 IRX1P78414 480 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 SQLEQ14534 574 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 BCL2A1Q16548 175 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 PLPPR5Q32ZL2 321 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 SLC25A35Q3KQZ1 300 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 GPAT3Q53EU6 434 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 CHMP1BQ7LBR1 199 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 GRAMD2AQ8IUY3 354 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 TNIP2Q8NFZ5 429 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 MBD3L2Q8NHZ7 208 aaPredicted RBP15.32■□□□□ 0.04
CLDND1-219ENST00000508659 STON2Q8WXE9 905 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 ROPN1LQ96C74 230 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 UCK2Q9BZX2 261 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 CALHM2Q9HA72 323 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 MED4Q9NPJ6 270 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 MED17Q9NVC6 651 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 MKLN1Q9UL63 735 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 WDR45Q9Y484 360 aa15.32■□□□□ 0.04
CLDND1-219ENST00000508659 CYSRT1A8MQ03 144 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 SHISA8B8ZZ34 492 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 HMGN4O00479 90 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 DVL2O14641 736 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 FCMRO60667 390 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 TOXO94900 526 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 BMP5P22003 454 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 P2RX1P51575 399 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 EEFSECP57772 596 aaKnown RBP15.31■□□□□ 0.04
CLDND1-219ENST00000508659 FUT5Q11128 374 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF141Q15928 474 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 OLIG3Q7RTU3 272 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 ZNF619Q8N2I2 560 aa15.31■□□□□ 0.04
CLDND1-219ENST00000508659 GTPBP8Q8N3Z3 284 aaPredicted RBP15.31■□□□□ 0.04
CLDND1-219ENST00000508659 NAXEQ8NCW5 288 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms