RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 LATO43561 262 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 TBX19O60806 448 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 TM7SF2O76062 418 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 PSMA5P28066 241 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 ADSSP30520 456 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 PRKAR2BP31323 418 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 CHI3L1P36222 383 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 PLA2G16P53816 162 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 CNTN2Q02246 1040 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 PJVKQ0ZLH3 352 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 NDUFA9Q16795 377 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 RABGAP1LQ5R372 815 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 GALNT17Q6IS24 598 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 ACSM5Q6NUN0 579 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 UFSP1Q6NVU6 142 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 APTXQ7Z2E3 356 aaKnown RBP3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 SERPINA9Q86WD7 417 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 GPR65Q8IYL9 337 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 ZNF525Q8N782 197 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 GMCL1P1Q8NEA9 526 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 OR2T34Q8NGX1 318 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 PNPT1Q8TCS8 783 aaKnown RBP3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 RAET1EQ8TD07 263 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 AENQ8WTP8 325 aaKnown RBP3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 DUSP16Q9BY84 665 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 DEFB126Q9BYW3 111 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 RAB33BQ9H082 229 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 AATFQ9NY61 560 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 VSIG4Q9Y279 399 aa3.03□□□□□ -1.92
HMGB1P28-201ENST00000507778 IGLV3-10A0A075B6K4 115 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 XPO1O14980 1071 aaKnown RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZSCAN12O43309 604 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 EFNA2O43921 213 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 BCAS1O75363 584 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 SCRG1O75711 98 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 CABYRO75952 493 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 NEBLO76041 1014 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 SERPINA2P20848 420 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 NT5EP21589 574 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 MRPS11P82912 194 aaKnown RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 EWSR1Q01844 656 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 CSTF1Q05048 431 aaKnown RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 RIPPLY1Q0D2K3 151 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 ST3GAL3Q11203 375 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 PDK4Q16654 411 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 PAGE2BQ5JRK9 111 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF658Q5TYW1 1059 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 METTL11BQ5VVY1 283 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 FAHD2BQ6P2I3 314 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 CES3Q6UWW8 571 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 APOBEC3FQ8IUX4 373 aaKnown RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 GPR137CQ8N3F9 429 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR13F1Q8NGS4 319 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 ARNTL2Q8WYA1 636 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 OSTF1Q92882 214 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 PSMG2Q969U7 264 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 FAHD2AQ96GK7 314 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 VSIG2Q96IQ7 327 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR5B2Q96R09 309 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 PPDPFQ9H3Y8 114 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 RMND5AQ9H871 391 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 MEAF6Q9HAF1 191 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF275Q9NSD4 429 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 SNX6Q9UNH7 406 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 WDR45Q9Y484 360 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 OARD1Q9Y530 152 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 PPIAL4AQ9Y536 164 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 FLVCR1Q9Y5Y0 555 aa3.02□□□□□ -1.93
HMGB1P28-201ENST00000507778 KIF16BQ96L93 1317 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 IGLV8-61A0A075B6I0 122 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 DHRS7CA6NNS2 312 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 B4DXG7 233 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 FCN1O00602 326 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 CDX4O14627 284 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 CPLX1O14810 134 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 KIAA0754O94854 1291 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 ADCY5O95622 1261 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 PGK1P00558 417 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 F10P00742 488 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 GIG44P09565 113 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 TPSB2P20231 275 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 TBXA2RP21731 343 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 OTX2P32243 289 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 CA8P35219 290 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 EFNA3P52797 238 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 LIM2P55344 173 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 OTUD4Q01804 1114 aaKnown RBP3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 SELPLGQ14242 412 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 LAGE3Q14657 143 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 KIAA0040Q15053 153 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 TPSAB1Q15661 275 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 OR5M10Q6IEU7 315 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 KIAA1328Q86T90 577 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 LINC01561Q8N1V8 128 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 LRRC43Q8N309 656 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 C15orf54Q8N8G6 183 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 ZNF540Q8NDQ6 660 aa3.01□□□□□ -1.93
HMGB1P28-201ENST00000507778 DENND6BQ8NEG7 585 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms