RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NPIPA8P0DM63 369 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 UBL4AP11441 157 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 HSD17B1P14061 328 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 ZNF24P17028 368 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 CPOXP36551 454 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 PTGDSP41222 190 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 SUMO3P55854 103 aaPredicted RBP18.34■□□□□ 0.53
USP53-203ENST00000507597 BNIP2Q12982 314 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 GANABQ14697 944 aaKnown RBP18.34■□□□□ 0.53
USP53-203ENST00000507597 HYAL4Q2M3T9 481 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 BICRALQ6AI39 1079 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 CCDC80Q76M96 950 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 ARMC8Q8IUR7 673 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 TOR1AIP2Q8NFQ8 470 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 B4GALNT2Q8NHY0 566 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 LZICQ8WZA0 190 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 POP5Q969H6 163 aaKnown RBP18.34■□□□□ 0.53
USP53-203ENST00000507597 MMADHCQ9H3L0 296 aaPredicted RBP18.34■□□□□ 0.53
USP53-203ENST00000507597 MUC13Q9H3R2 512 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 RUBCNLQ9H714 662 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 PROK2Q9HC23 129 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 DEPPQ9NTK1 212 aa18.34■□□□□ 0.53
USP53-203ENST00000507597 ZZEF1O43149 2961 aa18.33■□□□□ 0.53
USP53-203ENST00000507597 IGLV3-32A0A0A0MS00 114 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 M0QX08 132 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 GNB5O14775 395 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 TFECO14948 347 aaPredicted RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 PABPC4LP0CB38 370 aaKnown RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 RPS4Y1P22090 263 aaKnown RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 PRKAR1BP31321 381 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 SLC6A8P48029 635 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 P2RX1P51575 399 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 GAS1P54826 345 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 DSCR4P56555 118 aaPredicted RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 PPIAP62937 165 aaKnown RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 ELOAQ14241 798 aaKnown RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 MAPK11Q15759 364 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 RPS26P11Q5JNZ5 115 aaPredicted RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 ZNF550Q7Z398 422 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 C10orf111Q8N326 155 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 SLC35B4Q969S0 331 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 MCUR1Q96AQ8 359 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 RNF145Q96MT1 663 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 PINK1Q9BXM7 581 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 TTTY12Q9BZ98 90 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 LAT2Q9GZY6 243 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 FLRT3Q9NZU0 649 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 MAGEL2Q9UJ55 1249 aa18.33■□□□□ 0.52
USP53-203ENST00000507597 ZNF443Q9Y2A4 671 aaPredicted RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 TNRC6AQ8NDV7 1962 aaKnown RBP18.33■□□□□ 0.52
USP53-203ENST00000507597 HCRTR2O43614 444 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 DNAJC8O75937 253 aaPredicted RBP18.32■□□□□ 0.52
USP53-203ENST00000507597 SORBS2O94875 1100 aaKnown RBP18.32■□□□□ 0.52
USP53-203ENST00000507597 GDF1P27539 372 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 KDELR2P33947 212 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 PCBP3P57721 371 aaKnown RBP18.32■□□□□ 0.52
USP53-203ENST00000507597 CBFBQ13951 182 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 SLC10A1Q14973 349 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 TOMM20Q15388 145 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 RNF220Q5VTB9 566 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 FAM109AQ8N4B1 249 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 FIG4Q92562 907 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 NTNG2Q96CW9 530 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 THTPAQ9BU02 230 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 EXOSC3Q9NQT5 275 aaKnown RBP18.32■□□□□ 0.52
USP53-203ENST00000507597 ADPRHL2Q9NX46 363 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 BAG5Q9UL15 447 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 MRPS18CQ9Y3D5 142 aaKnown RBP18.32■□□□□ 0.52
USP53-203ENST00000507597 LOC400499M0QZD8 3231 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 CNTRLQ7Z7A1 2325 aa18.32■□□□□ 0.52
USP53-203ENST00000507597 A0A087WZY1 265 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 CXCR6O00574 342 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 CYP7B1O75881 506 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 ZIC2O95409 532 aaPredicted RBP18.31■□□□□ 0.52
USP53-203ENST00000507597 NUDT14O95848 222 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 PGCP20142 388 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 ME2P23368 584 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 AQP1P29972 269 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 ZNF41P51814 821 aaPredicted RBP18.31■□□□□ 0.52
USP53-203ENST00000507597 FOXO1Q12778 655 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 MAPK14Q16539 360 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 KRTCAP3Q53RY4 240 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 DHRS4L2Q6PKH6 230 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 APOOLQ6UXV4 268 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 OLIG3Q7RTU3 272 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 GRAMD2AQ8IUY3 354 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 TMCO5AQ8N6Q1 288 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 GATSQ8NAP1 163 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 FBXO27Q8NI29 283 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 FAM162AQ96A26 154 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 ZG16BQ96DA0 208 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 GNRHR2Q96P88 292 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 DSN1Q9H410 356 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 STOML1Q9UBI4 398 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 CD300AQ9UGN4 299 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 RPS6KA6Q9UK32 745 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 DKKL1Q9UK85 242 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 C15orf41Q9Y2V0 281 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 CACNA1GO43497 2377 aa18.31■□□□□ 0.52
USP53-203ENST00000507597 C2orf72A6NCS6 295 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms