RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 KCNJ11Q14654 390 aa2.54□□□□□ -2
LSM6-205ENST00000507449 GSG1Q2KHT4 349 aa2.54□□□□□ -2
LSM6-205ENST00000507449 CCDC57Q2TAC2 916 aa2.54□□□□□ -2
LSM6-205ENST00000507449 NADK2Q4G0N4 442 aa2.54□□□□□ -2
LSM6-205ENST00000507449 SBK1Q52WX2 424 aa2.54□□□□□ -2
LSM6-205ENST00000507449 TEX44Q53QW1 395 aa2.54□□□□□ -2
LSM6-205ENST00000507449 RABGAP1LQ5R372 815 aa2.54□□□□□ -2
LSM6-205ENST00000507449 DCST2Q5T1A1 773 aa2.54□□□□□ -2
LSM6-205ENST00000507449 ACSM5Q6NUN0 579 aa2.54□□□□□ -2
LSM6-205ENST00000507449 FAM3CQ92520 227 aa2.54□□□□□ -2
LSM6-205ENST00000507449 RPL3LQ92901 407 aaKnown RBP2.54□□□□□ -2
LSM6-205ENST00000507449 NOL4LQ96MY1 436 aaPredicted RBP2.54□□□□□ -2
LSM6-205ENST00000507449 SPRR3Q9UBC9 169 aa2.54□□□□□ -2
LSM6-205ENST00000507449 ABCD2Q9UBJ2 740 aa2.54□□□□□ -2
LSM6-205ENST00000507449 CRLS1Q9UJA2 301 aa2.54□□□□□ -2
LSM6-205ENST00000507449 RIMS3Q9UJD0 308 aa2.54□□□□□ -2
LSM6-205ENST00000507449 MOKQ9UQ07 419 aa2.54□□□□□ -2
LSM6-205ENST00000507449 KIF3AQ9Y496 699 aa2.54□□□□□ -2
LSM6-205ENST00000507449 SPACA6W5XKT8 324 aa2.54□□□□□ -2
LSM6-205ENST00000507449 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.53□□□□□ -2
LSM6-205ENST00000507449 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.53□□□□□ -2
LSM6-205ENST00000507449 E9PLD3 99 aa2.53□□□□□ -2
LSM6-205ENST00000507449 PPIAL4DF5H284 164 aa2.53□□□□□ -2
LSM6-205ENST00000507449 H2AFZP0C0S5 128 aa2.53□□□□□ -2
LSM6-205ENST00000507449 TBXA2RP21731 343 aa2.53□□□□□ -2
LSM6-205ENST00000507449 HNRNPA2B1P22626 353 aaKnown RBP2.53□□□□□ -2
LSM6-205ENST00000507449 UQCRC2P22695 453 aa2.53□□□□□ -2
LSM6-205ENST00000507449 ATP5A1P25705 553 aaKnown RBP2.53□□□□□ -2
LSM6-205ENST00000507449 GNPDA1P46926 289 aa2.53□□□□□ -2
LSM6-205ENST00000507449 BDH1Q02338 343 aa2.53□□□□□ -2
LSM6-205ENST00000507449 LAGE3Q14657 143 aa2.53□□□□□ -2
LSM6-205ENST00000507449 TAF7Q15545 349 aaPredicted RBP2.53□□□□□ -2
LSM6-205ENST00000507449 SLC5A12Q1EHB4 618 aa2.53□□□□□ -2
LSM6-205ENST00000507449 SLC36A3Q495N2 470 aa2.53□□□□□ -2
LSM6-205ENST00000507449 MARC1Q5VT66 337 aa2.53□□□□□ -2
LSM6-205ENST00000507449 SCYL2Q6P3W7 929 aa2.53□□□□□ -2
LSM6-205ENST00000507449 KIAA1328Q86T90 577 aa2.53□□□□□ -2
LSM6-205ENST00000507449 TMEM17Q86X19 198 aa2.53□□□□□ -2
LSM6-205ENST00000507449 ZNF677Q86XU0 584 aa2.53□□□□□ -2
LSM6-205ENST00000507449 LRRC43Q8N309 656 aa2.53□□□□□ -2
LSM6-205ENST00000507449 FBXL16Q8N461 479 aa2.53□□□□□ -2
LSM6-205ENST00000507449 GMCL1P1Q8NEA9 526 aa2.53□□□□□ -2
LSM6-205ENST00000507449 DENND6BQ8NEG7 585 aa2.53□□□□□ -2
LSM6-205ENST00000507449 OR5L2Q8NGL0 311 aa2.53□□□□□ -2
LSM6-205ENST00000507449 OR13F1Q8NGS4 319 aa2.53□□□□□ -2
LSM6-205ENST00000507449 RAET1EQ8TD07 263 aa2.53□□□□□ -2
LSM6-205ENST00000507449 SPRYD4Q8WW59 207 aaPredicted RBP2.53□□□□□ -2
LSM6-205ENST00000507449 PSMG2Q969U7 264 aa2.53□□□□□ -2
LSM6-205ENST00000507449 SDSLQ96GA7 329 aa2.53□□□□□ -2
LSM6-205ENST00000507449 OR5M11Q96RB7 305 aa2.53□□□□□ -2
LSM6-205ENST00000507449 CITED1Q99966 193 aa2.53□□□□□ -2
LSM6-205ENST00000507449 ERP44Q9BS26 406 aa2.53□□□□□ -2
LSM6-205ENST00000507449 TMEM117Q9H0C3 514 aa2.53□□□□□ -2
LSM6-205ENST00000507449 RIBC2Q9H4K1 309 aa2.53□□□□□ -2
LSM6-205ENST00000507449 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.53□□□□□ -2
LSM6-205ENST00000507449 PAK1IP1Q9NWT1 392 aaPredicted RBP2.53□□□□□ -2
LSM6-205ENST00000507449 WRAP73Q9P2S5 460 aaPredicted RBP2.53□□□□□ -2
LSM6-205ENST00000507449 DPM3Q9P2X0 92 aa2.53□□□□□ -2
LSM6-205ENST00000507449 SAMD4AQ9UPU9 718 aaKnown RBP2.53□□□□□ -2
LSM6-205ENST00000507449 SMAD5-AS1Q9Y6J3 95 aa2.53□□□□□ -2
LSM6-205ENST00000507449 LOC100131303A0A0U1RQF7 123 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 KLF18A0A0U1RQI7 1052 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 A0A1B0GVY2 172 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 OR6C65A6NJZ3 312 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ZNF705EA8MWA4 302 aaPredicted RBP2.52□□□□□ -2.01
LSM6-205ENST00000507449 H3BMQ9 156 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 BCAS1O75363 584 aaPredicted RBP2.52□□□□□ -2.01
LSM6-205ENST00000507449 ZNF254O75437 659 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 CA1P00915 261 aaPredicted RBP2.52□□□□□ -2.01
LSM6-205ENST00000507449 PSMA2P25787 234 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ADSSP30520 456 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 NF2P35240 595 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 RGS4P49798 205 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 PLA2G16P53816 162 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 CD47Q08722 323 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 SELPLGQ14242 412 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 PRR4Q16378 134 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 PDK4Q16654 411 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 GGTA1PQ4G0N0 100 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 WSCD1Q658N2 575 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 OR8G2PQ6IF36 304 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 FAM199XQ6PEV8 388 aaPredicted RBP2.52□□□□□ -2.01
LSM6-205ENST00000507449 CXCL17Q6UXB2 119 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 LRRC70Q7Z2Q7 622 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 GPD1LQ8N335 351 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ZNF525Q8N782 197 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 OR2T3Q8NH03 318 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ZPLD1Q8TCW7 415 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 TRUB1Q8WWH5 349 aaKnown RBP2.52□□□□□ -2.01
LSM6-205ENST00000507449 THRSPQ92748 146 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 SLC6A7Q99884 636 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 C19orf24Q9BVV8 132 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 DUSP16Q9BY84 665 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 SLITRK2Q9H156 845 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 GLT8D2Q9H1C3 349 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 GLIPR2Q9H4G4 154 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 RMND5AQ9H871 391 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 CAB39LQ9H9S4 337 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 TNFRSF19Q9NS68 423 aa2.52□□□□□ -2.01
LSM6-205ENST00000507449 ZNF275Q9NSD4 429 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms