RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SLC1A6P48664 564 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 RPL14P50914 215 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 EEFSECP57772 596 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 HBA1P69905 142 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 GUSBP1Q15486 140 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 CD226Q15762 336 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 PLPPR5Q32ZL2 321 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 CCNJQ5T5M9 372 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 OR2A2Q6IF42 318 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 SPNS3Q6ZMD2 512 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 CROCCP2Q86T23 111 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 GGNQ86UU5 652 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 MISPQ8IVT2 679 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 UBQLNLQ8IYU4 475 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 KIRREL3Q8IZU9 778 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 GTPBP8Q8N3Z3 284 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 OR8J2Q8NGG1 315 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 OR5M1Q8NGP8 315 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 FIG4Q92562 907 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 JADE3Q92613 823 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 NRGNQ92686 78 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 CDS1Q92903 461 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 MOAP1Q96BY2 351 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 STARD4Q96DR4 205 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 ADGRG7Q96K78 797 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 NPAS1Q99742 590 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 GPATCH1Q9BRR8 931 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 RBM24Q9BX46 236 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 ACTRT3Q9BYD9 372 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 SERHL2Q9H4I8 314 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 AKTIPQ9H8T0 292 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 RNF122Q9H9V4 155 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 DNAJB12Q9NXW2 375 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 GALNT8Q9NY28 637 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 PACSIN3Q9UKS6 424 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 ZNF175Q9Y473 711 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 SNX8Q9Y5X2 465 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 AP4B1Q9Y6B7 739 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 MTORP42345 2549 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 TUBAL3A6NHL2 446 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 SHISA8B8ZZ34 492 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 H3BML4 177 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 RNASET2O00584 256 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 MSTNO14793 375 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 SEC14L5O43304 696 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 ICMTO60725 284 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 GOSR1O95249 250 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 CGAP01215 116 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 KRT16P08779 473 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 LINGO3P0C6S8 592 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 EPXP11678 715 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 BGNP21810 368 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 DNAJA1P31689 397 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 KIR2DL2P43627 348 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 PHC1P78364 1004 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 BST1Q10588 318 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 STX3Q13277 289 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 TP53BP2Q13625 1128 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 CTU2Q2VPK5 515 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 KLHL26Q53HC5 615 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 DCST2Q5T1A1 773 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 OR4F3Q6IEY1 312 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 OGFOD2Q6N063 350 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 MTERF4Q7Z6M4 381 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 LUZP2Q86TE4 346 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 GATSQ8NAP1 163 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 OR5AK3PQ8NH89 298 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 FNDC9Q8TBE3 224 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 POC1BQ8TC44 478 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 ADAMTS15Q8TE58 950 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 ZBTB8AQ96BR9 441 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 TESCQ96BS2 214 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 ZNF845Q96IR2 970 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 PINK1Q9BXM7 581 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 POLDIP3Q9BY77 421 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 MEAF6Q9HAF1 191 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 MED17Q9NVC6 651 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 ITGB1BP2Q9UKP3 347 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 FAF1Q9UNN5 650 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 VDAC3Q9Y277 283 aa8.16□□□□□ -1.1
PDLIM5-209ENST00000506632 NPIPA5A0A0B4J1W7 369 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 NPIPA7E9PJI5 369 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 SCDO00767 359 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 ADAMDEC1O15204 470 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 OIP5O43482 229 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 GMFGO60234 142 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 SNNO75324 88 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 AQP8O94778 261 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 NPIPA8P0DM63 369 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 NID1P14543 1247 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 HPGDP15428 266 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 LBPP18428 481 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 SLC18A1P54219 525 aa8.15□□□□□ -1.1
PDLIM5-209ENST00000506632 ATP12AP54707 1039 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms