RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RIPPLY3P57055 190 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 POU6F2P78424 691 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 OCRLQ01968 901 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 MPP2Q14168 576 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 CTU2Q2VPK5 515 aaKnown RBP12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 ATP6AP1LQ52LC2 224 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 FBXW10Q5XX13 1052 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 CDC73Q6P1J9 531 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 NUDCD3Q8IVD9 361 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 GTPBP8Q8N3Z3 284 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 COX18Q8N8Q8 333 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 FNDC5Q8NAU1 212 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 ACTRT2Q8TDY3 377 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 PKNOX2Q96KN3 472 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 STACQ99469 402 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 DUSP22Q9NRW4 184 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 GIN1Q9NXP7 522 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 NDRG3Q9UGV2 375 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 CLEC4AQ9UMR7 237 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 TESMINQ9Y4I5 508 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 SNX8Q9Y5X2 465 aa12.92□□□□□ -0.34
CDC42SE2-209ENST00000506419 NPIPA5A0A0B4J1W7 369 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 A0A0J9YW62 118 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 A0A1W2PQD3 144 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 NPIPA7E9PJI5 369 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 EIF1AYO14602 144 aaKnown RBP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 CASKO14936 926 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 ADAMDEC1O15204 470 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 CTIFO43310 598 aaKnown RBP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 LINGO3P0C6S8 592 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 NPIPA8P0DM63 369 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 CD8BP10966 210 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 CPOXP36551 454 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 EIF1AXP47813 144 aaKnown RBP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 RAC1P63000 192 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 EMX2Q04743 252 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZNF844Q08AG5 666 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 SGCBQ16585 318 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 PLPPR5Q32ZL2 321 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 KLHL26Q53HC5 615 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 CBLN3Q6UW01 205 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 MREGQ8N565 214 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 OR10D3Q8NH80 312 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 B4GALNT2Q8NHY0 566 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 JADE3Q92613 823 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 TUBGCP3Q96CW5 907 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 RNF145Q96MT1 663 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 ACTRT3Q9BYD9 372 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 C6orf203Q9P0P8 240 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 NIPBLQ6KC79 2804 aaeCLIP12.91□□□□□ -0.34
CDC42SE2-209ENST00000506419 C7orf72A4D263 438 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 DEFB108AA8MXU0 73 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 NPIPB9F8W1W9 429 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 SCDO00767 359 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CXCL13O43927 109 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 RAF1P04049 648 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZNF17P17021 662 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CD53P19397 219 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 KLK2P20151 261 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 PRPS1L1P21108 318 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 SHC1P29353 583 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CCKARP32238 428 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 UGT2B10P36537 528 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 RPL3P39023 403 aaKnown RBP12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CLDN8P56748 225 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 HBA1P69905 142 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ADAM8P78325 824 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 LSM12Q3MHD2 195 aaKnown RBP12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ANKRD34AQ69YU3 496 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CAMKMTQ7Z624 323 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 WDR75Q8IWA0 830 aaKnown RBP12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CLEC4FQ8N1N0 589 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZNF781Q8N8C0 355 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ADAMTS15Q8TE58 950 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 OSTF1Q92882 214 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ZBTB8AQ96BR9 441 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 CHMP6Q96FZ7 201 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ALPK1Q96QP1 1244 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 BHLHE41Q9C0J9 482 aaPredicted RBP12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 TMEM185BQ9H7F4 350 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 AKTIPQ9H8T0 292 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 PLSCR4Q9NRQ2 329 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 ELOVL5Q9NYP7 299 aa12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 EIF3LQ9Y262 564 aaKnown RBP12.9□□□□□ -0.34
CDC42SE2-209ENST00000506419 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 SCN2BO60939 215 aa12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 GOSR1O95249 250 aa12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 DHRS4L1P0CG22 281 aa12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 POU2F1P14859 743 aa12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 HPGDP15428 266 aa12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 DDX5P17844 614 aaKnown RBP12.89□□□□□ -0.35
CDC42SE2-209ENST00000506419 LOXP28300 417 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms