RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ROS1P08922 2347 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NPIPA5A0A0B4J1W7 369 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 A0A0G2JK05 382 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 A0A0J9YW62 118 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NOTOA8MTQ0 251 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NPIPA7E9PJI5 369 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ATP6V1G2-DDX39BF2Z307 99 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 AP3B1O00203 1094 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SMAD9O15198 467 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 TSPAN2O60636 221 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 STK16O75716 305 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SLC35E2BP0CK96 405 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SLC35E2P0CK97 266 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NPIPA8P0DM63 369 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 PSMB1P20618 241 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 S1PR1P21453 382 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 GSTM2P28161 218 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 HPDP32754 393 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 GALNSP34059 522 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 KRT20P35900 424 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ELK3P41970 407 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NR4A2P43354 598 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 MAGEA6P43360 314 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 HNMTP50135 292 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 EMDP50402 254 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 PDLIM4P50479 330 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SLURP1P55000 103 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 FOXG1P55316 489 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 DSCR4P56555 118 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 RPS3AP61247 264 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 SLC25A3Q00325 362 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 CDKL1Q00532 357 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 CDK16Q00536 496 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 MGAT2Q10469 447 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 DLG1Q12959 904 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SNTA1Q13424 505 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SQLEQ14534 574 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 GANABQ14697 944 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 SLMAPQ14BN4 828 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 MLC1Q15049 377 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 CCNG2Q16589 344 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ZNF239Q16600 458 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 HIST2H2ACQ16777 129 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.19□□□□□ -1.9
USP46-205ENST00000504078 PRICKLE4Q2TBC4 344 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NDUFAF6Q330K2 333 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 TMEM35AQ53FP2 167 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SPANXN3Q5MJ09 141 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 RNASEH2BQ5TBB1 312 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 HBMQ6B0K9 141 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 HIST2H2AA3Q6FI13 130 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 GALNT18Q6P9A2 607 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 VHLLQ6RSH7 139 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 RPS27LQ71UM5 84 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 LRRC70Q7Z2Q7 622 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NUP54Q7Z3B4 507 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 CMC1Q7Z7K0 106 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ZC3HC1Q86WB0 502 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 RELL1Q8IUW5 271 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 CNTN4Q8IWV2 1026 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 TUSC5Q8IXB3 177 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 LMNTD2Q8IXW0 634 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 LAS2Q8IYD9 372 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 GABRG1Q8N1C3 465 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 FBXL14Q8N1E6 418 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ZCCHC7Q8N3Z6 543 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 SVOPLQ8N434 492 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NKAPQ8N5F7 415 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 TEX9Q8N6V9 391 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 FADS6Q8N9I5 356 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 PDPRQ8NCN5 879 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SRFBP1Q8NEF9 429 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 STEAP2Q8NFT2 490 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 OR4K14Q8NGD5 310 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 OR52B6Q8NGF0 335 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 OR2V1Q8NHB1 315 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 C22orf15Q8WYQ4 148 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 MAGOHBQ96A72 148 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 EXOSC8Q96B26 276 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 RGMAQ96B86 450 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 TMCO6Q96DC7 493 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 C1GALT1C1Q96EU7 318 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 SLC35A4Q96G79 324 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 GMPPAQ96IJ6 420 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 FOXN4Q96NZ1 517 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ZNF300Q96RE9 604 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 SLC6A7Q99884 636 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 VRK1Q99986 396 aaPredicted RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 CENPKQ9BS16 269 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 C1QTNF3Q9BXJ4 246 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 TRIM5Q9C035 493 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 NT5DC2Q9H857 520 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 EQTNQ9NQ60 294 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 CBLN4Q9NTU7 201 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 FAIMQ9NVQ4 179 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 OPTCQ9UBM4 332 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 ASIC3Q9UHC3 531 aa3.19□□□□□ -1.9
USP46-205ENST00000504078 MCTS1Q9ULC4 181 aaKnown RBP3.19□□□□□ -1.9
USP46-205ENST00000504078 GPR52Q9Y2T5 361 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms