RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CLDN20P56880 219 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 RAC1P63000 192 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 EMX2Q04743 252 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 KEAP1Q14145 624 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 LASP1Q14847 261 aaKnown RBP10.76□□□□□ -0.69
MED28-203ENST00000503945 PTGR1Q14914 329 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 PGS1Q32NB8 556 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 KRT71Q3SY84 523 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 XKR7Q5GH72 579 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 PDSS1Q5T2R2 415 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 GTF2IRD2BQ6EKJ0 949 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 BTLAQ7Z6A9 289 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 GTF2IRD2Q86UP8 949 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 GATSQ8NAP1 163 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 ZNF527Q8NB42 609 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 OR56A1Q8NGH5 318 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 B4GALNT2Q8NHY0 566 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 FBXO30Q8TB52 745 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 FNDC9Q8TBE3 224 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 FIG4Q92562 907 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 ZBTB8AQ96BR9 441 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 MOAP1Q96BY2 351 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 ZNF845Q96IR2 970 aaPredicted RBP10.76□□□□□ -0.69
MED28-203ENST00000503945 DUSP26Q9BV47 211 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 BHLHE41Q9C0J9 482 aaPredicted RBP10.76□□□□□ -0.69
MED28-203ENST00000503945 CENPHQ9H3R5 247 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 RNF122Q9H9V4 155 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 FBXO34Q9NWN3 711 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 ZNF226Q9NYT6 803 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 GIMAP2Q9UG22 337 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 PCDHGB4Q9UN71 923 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.76□□□□□ -0.69
MED28-203ENST00000503945 A0A1W2PQD3 144 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 DUXAA6NLW8 204 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 C16orf97H3BN30 126 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 GTPBP1O00178 669 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 EIF1AYO14602 144 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 SKAP2O75563 359 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 SNUPNO95149 360 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 C6orf47O95873 294 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 PLGP00747 810 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 OPN1LWP04000 364 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 MYZAPP0CAP1 466 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 G6PDP11413 515 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 FCGR2AP12318 317 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 FOSL1P15407 271 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 ME2P23368 584 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 ARRB2P32121 409 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 CD79BP40259 229 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 EIF1P41567 113 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 ETV4P43268 484 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 EIF1AXP47813 144 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 RPL14P50914 215 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 CLDN8P56748 225 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 TMEM44Q2T9K0 475 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 SMU1Q2TAY7 513 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 CCNJQ5T5M9 372 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 PPP4R4Q6NUP7 873 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 CDC73Q6P1J9 531 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 FAM214BQ7L5A3 538 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 MTERF4Q7Z6M4 381 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 CROCCP2Q86T23 111 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 GTPBP8Q8N3Z3 284 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 MREGQ8N565 214 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 KRTCAP2Q8N6L1 136 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 METTL25Q8N6Q8 603 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 ZNF610Q8N9Z0 462 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 VPS37AQ8NEZ2 397 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 PSMA8Q8TAA3 256 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 PHOSPHO1Q8TCT1 267 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 CDS1Q92903 461 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 OTUB1Q96FW1 271 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 SH3YL1Q96HL8 342 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 WFIKKN1Q96NZ8 548 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 ALPK1Q96QP1 1244 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 SSU72Q9NP77 194 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 KCNK9Q9NPC2 374 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 SIRT3Q9NTG7 399 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 NOP53Q9NZM5 478 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.75□□□□□ -0.69
MED28-203ENST00000503945 MCTS1Q9ULC4 181 aaKnown RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 PROCRQ9UNN8 238 aa10.75□□□□□ -0.69
MED28-203ENST00000503945 V9GYY5 206 aaPredicted RBP10.75□□□□□ -0.69
MED28-203ENST00000503945 FLNAP21333 2647 aaKnown RBP10.74□□□□□ -0.69
MED28-203ENST00000503945 SHISA8B8ZZ34 492 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 ADAMDEC1O15204 470 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 TM9SF1O15321 606 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 SYNGR4O95473 234 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 NUDT14O95848 222 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 RAF1P04049 648 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 SERPINE1P05121 402 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 TUBBP07437 444 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 CD8BP10966 210 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 POU2F1P14859 743 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 ZNF17P17021 662 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 CTBP2P56545 445 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 CARD18P57730 90 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 ABCE1P61221 599 aaKnown RBP10.74□□□□□ -0.69
MED28-203ENST00000503945 SIRPAP78324 504 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms