RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TRABD2AQ86V40 505 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 LILRA2Q8N149 483 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 PYROXD1Q8WU10 500 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 KCTD4Q8WVF5 259 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 CPSF2Q9P2I0 782 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
PDLIM7-210ENST00000503827 MGAM2Q2M2H8 2515 aa13.96□□□□□ -0.18
PDLIM7-210ENST00000503827 ARFGEF3Q5TH69 2177 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 IGHV4-61A0A0C4DH41 118 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 SFTPDP35247 375 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 COMPP49747 757 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 ZNHIT3Q15649 155 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 FAM83EQ2M2I3 478 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 PLPPR5Q32ZL2 321 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 APOOLQ6UXV4 268 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 FCRLAQ7L513 359 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 CTAGE3PQ8IX95 158 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 C1orf52Q8N6N3 182 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 INPP5KQ9BT40 448 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 SRXN1Q9BYN0 137 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 BHLHE41Q9C0J9 482 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 OCEL1Q9H607 264 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 BRF2Q9HAW0 419 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 SLC35C2Q9NQQ7 365 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 FARSBQ9NSD9 589 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 MED17Q9NVC6 651 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 PRSS50Q9UI38 385 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 TMEFF2Q9UIK5 374 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
PDLIM7-210ENST00000503827 TGP01266 2768 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 OR5H1A6NKK0 313 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 PGM3O95394 542 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 PDYNP01213 254 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 IL3P08700 152 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 ZNF23P17027 643 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 CD40P25942 277 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 OR3A2P47893 321 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 ZNF83P51522 516 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 SPOCK1Q08629 439 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 CARTPTQ16568 116 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 GRAMD1BQ3KR37 738 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 CENPLQ8N0S6 344 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 SLC43A2Q8N370 569 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 FAM110BQ8TC76 370 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 ACTRT2Q8TDY3 377 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 SELENOMQ8WWX9 145 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 FOXN4Q96NZ1 517 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 TRMOQ9BU70 441 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 C3orf14Q9HBI5 128 aa13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM7-210ENST00000503827 A0A087WV62 115 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 LOC390937A0A1W2PQ73 354 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 TCRBV9S1A1TA0A576 114 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 FAM159BA6NKW6 160 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 VENTXO95231 258 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 KCNH1O95259 989 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 IGHV1-2P23083 117 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 CDC25BP30305 580 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 MANFP55145 182 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 TRAF3Q13114 568 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 HEPACAMQ14CZ8 416 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 GGTA1PQ4G0N0 100 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 ARL13AQ5H913 290 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 CYS1Q717R9 158 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 CCDC91Q7Z6B0 441 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 ZNF540Q8NDQ6 660 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 OR4F6Q8NGB9 312 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 POC1BQ8TC44 478 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 GCDHQ92947 438 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 BBS4Q96RK4 519 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 MYOZ1Q9NP98 299 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 MYNNQ9NPC7 610 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 KLHL9Q9P2J3 617 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 MCM8Q9UJA3 840 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 SNX6Q9UNH7 406 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 C19orf53Q9UNZ5 99 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
PDLIM7-210ENST00000503827 GJE1A6NN92 205 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 ALG1L2C9J202 215 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 SLITRK5O94991 958 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 CREB1P16220 341 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 COX5AP20674 150 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 SHC1P29353 583 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 DR1Q01658 176 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 SLC18A2Q05940 514 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 KLC3Q6P597 504 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 PTGR2Q8N8N7 351 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 GATSQ8NAP1 163 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 OR52N5Q8NH56 324 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 SOX7Q9BT81 388 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 SHCBP1LQ9BZQ2 653 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 TRIM31Q9BZY9 425 aa13.92□□□□□ -0.18
PDLIM7-210ENST00000503827 BCO1Q9HAY6 547 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms