RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 AHRRA9YTQ3 701 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 UGT2B17O75795 530 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 CPN1P15169 458 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 AGAP20933 346 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 SMSP52788 366 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 GPR68Q15743 365 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 C1orf185Q5T7R7 199 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 ENPP6Q6UWR7 440 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 B3GNT6Q6ZMB0 384 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 FRRS1Q6ZNA5 592 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 NCCRP1Q6ZVX7 275 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 MRGPRGQ86SM5 289 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 RPRMLQ8N4K4 120 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 B4GALNT2Q8NHY0 566 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 PHOSPHO1Q8TCT1 267 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 AURKBQ96GD4 344 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 RPH3AQ9Y2J0 694 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 GMEB1Q9Y692 573 aa16.52■□□□□ 0.24
PDLIM7-209ENST00000503346 COL12A1Q99715 3063 aa16.52■□□□□ 0.23
PDLIM7-209ENST00000503346 DOPEY1Q5JWR5 2465 aa16.52■□□□□ 0.23
PDLIM7-209ENST00000503346 A0A087WZY1 265 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 SERINC4A6NH21 518 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 TNFRSF21O75509 655 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 LHX2P50458 406 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 SUMO3P55854 103 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 HPCAP84074 193 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF117Q03924 483 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 BCL2A1Q16548 175 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 SYPL1Q16563 259 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 TMEM44Q2T9K0 475 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 GPAT3Q53EU6 434 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 PDZK1Q5T2W1 519 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 XKRXQ6PP77 449 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 ARSKQ6UWY0 536 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 LRRC74BQ6ZQY2 392 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 MSRB3Q8IXL7 192 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF619Q8N2I2 560 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 ANKFN1Q8N957 763 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 SH3YL1Q96HL8 342 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 PIGQQ9BRB3 760 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 TTYH2Q9BSA4 534 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 THUMPD1Q9NXG2 353 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 ALKBH4Q9NXW9 302 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 SLC25A37Q9NYZ2 338 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 SLAMF8Q9P0V8 285 aa16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 LEF1Q9UJU2 399 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-209ENST00000503346 TRBV5-3A0A0A0MS03 114 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CENPVL1A0A0U1RR11 272 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 C7orf72A4D263 438 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 LINC01387J3KSC0 135 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CLIC1O00299 241 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 HCRTR2O43614 444 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 GMFGO60234 142 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 H6PDO95479 791 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CLDN1O95832 211 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CHRM4P08173 479 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 GLI4P10075 376 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 ETFAP13804 333 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 TCEA1P23193 301 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 ADH7P40394 386 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CRATP43155 626 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 NUP107P57740 925 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 DSTNP60981 165 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CHRNEQ04844 493 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 GTF3C1Q12789 2109 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 SF3A3Q12874 501 aaKnown RBP eCLIP16.5■□□□□ 0.232e-7■■■■■ 49.4
PDLIM7-209ENST00000503346 SF3B4Q15427 424 aaKnown RBP eCLIP16.5■□□□□ 0.237e-8■■■■□ 22.3
PDLIM7-209ENST00000503346 MAPK14Q16539 360 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 ACSF3Q4G176 576 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 RAET1LQ5VY80 246 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 DPP10Q8N608 796 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF614Q8N883 585 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 C10orf82Q8WW14 230 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 PMM1Q92871 262 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 SLC38A1Q9H2H9 487 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 RAD21L1Q9H4I0 556 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 MED17Q9NVC6 651 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 VAPAQ9P0L0 249 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 P2RX2Q9UBL9 471 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 ICAM5Q9UMF0 924 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CAMK2AQ9UQM7 478 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 CARD8Q9Y2G2 431 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 NDUFAF1Q9Y375 327 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 DNAJC13O75165 2243 aa16.5■□□□□ 0.23
PDLIM7-209ENST00000503346 OR2M5A3KFT3 312 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 GTPBP1O00178 669 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF264O43296 627 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 OIP5O43482 229 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 EIF4E2O60573 245 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 SNRPB2P08579 225 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 NR2F1P10589 423 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 UBL4AP11441 157 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 BMP2P12643 396 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF17P17021 662 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 PPIBP23284 216 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 STARP49675 285 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 RNF144AP50876 292 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 P2RX1P51575 399 aa16.49■□□□□ 0.23
PDLIM7-209ENST00000503346 ZNF41P51814 821 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms