RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SERPINB4P48594 390 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 CCT3P49368 545 aaKnown RBP14.6□□□□□ -0.07
SCLT1-204ENST00000503215 RIPPLY3P57055 190 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 EEFSECP57772 596 aaKnown RBP14.6□□□□□ -0.07
SCLT1-204ENST00000503215 GUSBP1Q15486 140 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 CTU2Q2VPK5 515 aaKnown RBP14.6□□□□□ -0.07
SCLT1-204ENST00000503215 PLPPR5Q32ZL2 321 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 OR2A2Q6IF42 318 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 EMBQ6PCB8 327 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 ZCCHC12Q6PEW1 402 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 LRIG3Q6UXM1 1119 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 RIMKLAQ8IXN7 391 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 FNDC5Q8NAU1 212 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 OR5P2Q8WZ92 322 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 TUBGCP3Q96CW5 907 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 COQ8BQ96D53 544 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 CHMP6Q96FZ7 201 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 ADGRG7Q96K78 797 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 PPP1R36Q96LQ0 422 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 RNF145Q96MT1 663 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 TMEM109Q9BVC6 243 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 C20orf27Q9GZN8 174 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 UBQLN4Q9NRR5 601 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 GPATCH2Q9NW75 528 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 C6orf203Q9P0P8 240 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-204ENST00000503215 ZNF175Q9Y473 711 aa14.6□□□□□ -0.07
SCLT1-204ENST00000503215 EIF1AYO14602 144 aaKnown RBP14.59□□□□□ -0.07
SCLT1-204ENST00000503215 EFNA2O43921 213 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 CD99P14209 185 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 SHC1P29353 583 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 EIF1AXP47813 144 aaKnown RBP14.59□□□□□ -0.07
SCLT1-204ENST00000503215 PRIM2P49643 509 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 EEF1A1P68104 462 aaKnown RBP14.59□□□□□ -0.07
SCLT1-204ENST00000503215 POU6F2P78424 691 aaPredicted RBP14.59□□□□□ -0.07
SCLT1-204ENST00000503215 ZNF844Q08AG5 666 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 SGCBQ16585 318 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 NDUFAF6Q330K2 333 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 EEF1A1P5Q5VTE0 462 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 PPP4R4Q6NUP7 873 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 WDR93Q6P2C0 686 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 ZNF550Q7Z398 422 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 TGIF2LYQ8IUE0 185 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 NUDCD3Q8IVD9 361 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 CLEC4FQ8N1N0 589 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 GTPBP8Q8N3Z3 284 aaPredicted RBP14.59□□□□□ -0.07
SCLT1-204ENST00000503215 OR10D3Q8NH80 312 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 OR5AK3PQ8NH89 298 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 PSMA8Q8TAA3 256 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 PIGUQ9H490 435 aa14.59□□□□□ -0.07
SCLT1-204ENST00000503215 A0A0J9YW62 118 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 DEFB108AA8MXU0 73 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 TNFSF11O14788 317 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 CXCL13O43927 109 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 RAF1P04049 648 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 KLK2P20151 261 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 MAPK1P28482 360 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 SERPINB5P36952 375 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 CD79BP40259 229 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 RPS26P62854 115 aaKnown RBP14.58□□□□□ -0.08
SCLT1-204ENST00000503215 FOXD4Q12950 439 aaPredicted RBP14.58□□□□□ -0.08
SCLT1-204ENST00000503215 TP53BP2Q13625 1128 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 MPP2Q14168 576 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCLT1-204ENST00000503215 ANKRD34AQ69YU3 496 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 CDC73Q6P1J9 531 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 CBLN3Q6UW01 205 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 OLIG3Q7RTU3 272 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 ZNF781Q8N8C0 355 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 MBD6Q96DN6 1003 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 STACQ99469 402 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 ACTRT3Q9BYD9 372 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 PARD6BQ9BYG5 372 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 SERHL2Q9H4I8 314 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 DUSP22Q9NRW4 184 aa14.58□□□□□ -0.08
SCLT1-204ENST00000503215 PRR14LQ5THK1 2151 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 NF1P21359 2839 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 A0A087WZY1 265 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 SCDO00767 359 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 LINGO3P0C6S8 592 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 HPGDP15428 266 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 ZNF17P17021 662 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 UGT2B10P36537 528 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 RPS3AP61247 264 aaKnown RBP14.57□□□□□ -0.08
SCLT1-204ENST00000503215 HBA1P69905 142 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 ADAM8P78325 824 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 ZNF117Q03924 483 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 KEAP1Q14145 624 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 CHI3L2Q15782 390 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 TOMM34Q15785 309 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-204ENST00000503215 PDCD2Q16342 344 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-204ENST00000503215 PGS1Q32NB8 556 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 KRT71Q3SY84 523 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 SPDYE7PQ495Y7 208 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 KLHL26Q53HC5 615 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 WDR75Q8IWA0 830 aaKnown RBP14.57□□□□□ -0.08
SCLT1-204ENST00000503215 CLECL1Q8IZS7 167 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 MREGQ8N565 214 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 OR5D16Q8NGK9 328 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 B4GALNT2Q8NHY0 566 aa14.57□□□□□ -0.08
SCLT1-204ENST00000503215 PHOSPHO1Q8TCT1 267 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms