RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PAQR5Q9NXK6 330 aaPredicted RBP9.63□□□□□ -0.87
SNCA-207ENST00000502987 SNX8Q9Y5X2 465 aa9.63□□□□□ -0.87
SNCA-207ENST00000502987 NUP214P35658 2090 aaPredicted RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 FAM171A2A8MVW0 826 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 DEFB108AA8MXU0 73 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 TNFSF11O14788 317 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 CXCL13O43927 109 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 TRIM13O60858 407 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 KCNK2O95069 426 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 NKX2-2O95096 273 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 CGAP01215 116 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 ACP2P11117 423 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 BMP2P12643 396 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 SDC1P18827 310 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 ATP6V1C1P21283 382 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 ASMTP46597 345 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 SLC6A8P48029 635 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 SERPINB4P48594 390 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 PCYT1AP49585 367 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 PRIM2P49643 509 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 POU6F2P78424 691 aaPredicted RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 KIAA0040Q15053 153 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 RFTN2Q52LD8 501 aaPredicted RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 ZNF385BQ569K4 471 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 HBMQ6B0K9 141 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 GTF2IRD2BQ6EKJ0 949 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 Q6ZSR9 355 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 PLEKHM3Q6ZWE6 761 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 R3HCC1LQ7Z5L2 792 aaKnown RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 GTF2IRD2Q86UP8 949 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 GGNQ86UU5 652 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 STK32CQ86UX6 486 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 CXorf67Q86X51 503 aaPredicted RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 WFDC8Q8IUA0 241 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 SLC16A11Q8NCK7 471 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 OR6K3Q8NGY3 331 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 OR10D3Q8NH80 312 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 PHOSPHO1Q8TCT1 267 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 EPS8L3Q8TE67 593 aaKnown RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 ZBTB8AQ96BR9 441 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 C16orf58Q96GQ5 468 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 Q96MF0 132 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 RNF145Q96MT1 663 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 MS4A4EQ96PG1 132 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 PIP5K1AQ99755 562 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 CCT7Q99832 543 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 GATA5Q9BWX5 397 aaPredicted RBP9.62□□□□□ -0.87
SNCA-207ENST00000502987 C12orf49Q9H741 205 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 PLSCR4Q9NRQ2 329 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 UBQLN4Q9NRR5 601 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 CCL27Q9Y4X3 112 aa9.62□□□□□ -0.87
SNCA-207ENST00000502987 IGLV3-32A0A0A0MS00 114 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 A0A1W2PRB8 838 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 TMEM114B3SHH9 223 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 ALG1L2C9J202 215 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 H7C1Q1 480 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 GTPBP1O00178 669 aaKnown RBP9.61□□□□□ -0.87
SNCA-207ENST00000502987 IFI6P09912 130 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 ZNF17P17021 662 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 PRPH2P23942 346 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 SFTPDP35247 375 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 HPCAL1P37235 193 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 CARD18P57730 90 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 RAC1P63000 192 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 OCRLQ01968 901 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 DUSP5Q16690 384 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 SPDYE7PQ495Y7 208 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 CCNJQ5T5M9 372 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 ZCCHC12Q6PEW1 402 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 BEND4Q6ZU67 534 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 SH2D5Q6ZV89 423 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
SNCA-207ENST00000502987 TDRPQ86YL5 185 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 MISPQ8IVT2 679 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 LILRA2Q8N149 483 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 LRRC75A-AS1Q8N1F1 130 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 ATP6V1C2Q8NEY4 427 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 OR2T11Q8NH01 316 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 OR2V1Q8NHB1 315 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 B4GALNT2Q8NHY0 566 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 AGR3Q8TD06 166 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 OSTF1Q92882 214 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 GMPPAQ96IJ6 420 aaPredicted RBP9.61□□□□□ -0.87
SNCA-207ENST00000502987 TRMOQ9BU70 441 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 BDH2Q9BUT1 245 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 PPCSQ9HAB8 311 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 EML4Q9HC35 981 aaKnown RBP9.61□□□□□ -0.87
SNCA-207ENST00000502987 TIGARQ9NQ88 270 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 ACSS1Q9NUB1 689 aaPredicted RBP9.61□□□□□ -0.87
SNCA-207ENST00000502987 ZCCHC3Q9NUD5 404 aaKnown RBP9.61□□□□□ -0.87
SNCA-207ENST00000502987 MED17Q9NVC6 651 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 FBXO34Q9NWN3 711 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 GIN1Q9NXP7 522 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 TMED5Q9Y3A6 229 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 TRAF6Q9Y4K3 522 aa9.61□□□□□ -0.87
SNCA-207ENST00000502987 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.6□□□□□ -0.87
SNCA-207ENST00000502987 A0A0J9YW62 118 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms