RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 STT3BQ8TCJ2 826 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 TRUB1Q8WWH5 349 aaKnown RBP20.32■□□□□ 0.84
PTPN13-205ENST00000502971 GPA33Q99795 319 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 HOXD1Q9GZZ0 328 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 TMEM27Q9HBJ8 222 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 ERVK-18Q9QC07 812 aa20.32■□□□□ 0.84
PTPN13-205ENST00000502971 FRG2CA6NGY1 282 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 D6RAR5 112 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 RGS10O43665 173 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 TIAF1O95411 115 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 GRK6P43250 576 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 DCDP81605 110 aaKnown RBP20.31■□□□□ 0.84
PTPN13-205ENST00000502971 TUBA3CQ13748 450 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF613Q6PF04 617 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 PTCHD4Q6ZW05 846 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF550Q7Z398 422 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 PRSS58Q8IYP2 241 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 RNF113BQ8IZP6 322 aaKnown RBP20.31■□□□□ 0.84
PTPN13-205ENST00000502971 SLC38A9Q8NBW4 561 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 CNOT9Q92600 299 aaKnown RBP20.31■□□□□ 0.84
PTPN13-205ENST00000502971 LCORQ96JN0 433 aaPredicted RBP20.31■□□□□ 0.84
PTPN13-205ENST00000502971 CCDC90BQ9GZT6 254 aa20.31■□□□□ 0.84
PTPN13-205ENST00000502971 DNAJB12Q9NXW2 375 aaKnown RBP20.31■□□□□ 0.84
PTPN13-205ENST00000502971 MRTO4Q9UKD2 239 aaKnown RBP20.31■□□□□ 0.84
PTPN13-205ENST00000502971 SH3D21A4FU49 640 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 BCAS1O75363 584 aaPredicted RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 IGFBP1P08833 259 aaPredicted RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 ZGLP1P0C6A0 271 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF806P0C7X5 589 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 ITIH1P19827 911 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 FPR3P25089 353 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 STAT5AP42229 794 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 SNRPGP62308 76 aaKnown RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 IL11RAQ14626 422 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 CASP12Q6UXS9 341 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 DBX2Q6ZNG2 339 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 PRR23CQ6ZRP0 262 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 RASSF6Q6ZTQ3 369 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 PRSS48Q7RTY5 328 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 OR13F1Q8NGS4 319 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 TMEM255BQ8WV15 326 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 ADIPOR1Q96A54 375 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 MYCBPQ99417 103 aaPredicted RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 TSC22D3Q99576 134 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 PRSS27Q9BQR3 290 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 NUDT9Q9BW91 350 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 SMOC1Q9H4F8 434 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 CLN6Q9NWW5 311 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 PSORS1C1Q9UIG5 152 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 COMMD3-BMI1R4GMX3 469 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 VGLL3A8MV65 326 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF701M0R085 212 aaPredicted RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 LDOC1O95751 146 aaPredicted RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 IL33O95760 270 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 GP1BAP07359 652 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 FGF5P12034 268 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 PCMT1P22061 227 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 GSTT1P30711 240 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 CSTF2P33240 577 aaKnown RBP eCLIP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 RNF144AP50876 292 aaPredicted RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 ALDH16A1Q8IZ83 802 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 SVOPQ8N4V2 548 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 OR1N1Q8NGS0 311 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 FAM46AQ96IP4 442 aaKnown RBP20.3■□□□□ 0.84
PTPN13-205ENST00000502971 COPS7AQ9UBW8 275 aa20.3■□□□□ 0.84
PTPN13-205ENST00000502971 OR6C76A6NM76 312 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 LRP3O75074 770 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 SEC14L2O76054 403 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 LYPD3O95274 346 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 LCN1P31025 176 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 ZFP36L1Q07352 338 aaKnown RBP20.29■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF385CQ66K41 422 aaPredicted RBP20.29■□□□□ 0.84
PTPN13-205ENST00000502971 OVCH1Q7RTY7 1134 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 CLVS1Q8IUQ0 354 aaPredicted RBP20.29■□□□□ 0.84
PTPN13-205ENST00000502971 NRMQ8IXM6 262 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 MYDGFQ969H8 173 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 TRIM2Q9C040 744 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 NXF5Q9H1B4 397 aaKnown RBP20.29■□□□□ 0.84
PTPN13-205ENST00000502971 SLC25A19Q9HC21 320 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 FKBP14Q9NWM8 211 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 OCIAD1Q9NX40 245 aa20.29■□□□□ 0.84
PTPN13-205ENST00000502971 COL5A1P20908 1838 aaPredicted RBP20.28■□□□□ 0.84
PTPN13-205ENST00000502971 C2orf92A0A1B0GVN3 265 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 LNP1A1A4G5 178 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 SERINC4A6NH21 518 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 CLCA1A8K7I4 914 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 KLF4O43474 513 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 ACP1P24666 158 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 ACAA2P42765 397 aaKnown RBP20.28■□□□□ 0.84
PTPN13-205ENST00000502971 GIPRP48546 466 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 CDK5Q00535 292 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 MVKQ03426 396 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 EMX1Q04741 257 aaPredicted RBP20.28■□□□□ 0.84
PTPN13-205ENST00000502971 GTF2IRD2BQ6EKJ0 949 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 GTF2IRD2Q86UP8 949 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 KIF18BQ86Y91 864 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 LSMEM1Q8N8F7 131 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF527Q8NB42 609 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 ZNF420Q8TAQ5 688 aaPredicted RBP20.28■□□□□ 0.84
PTPN13-205ENST00000502971 ATOH1Q92858 354 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms