RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TDP1Q9NUW8 608 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 TMEM184CQ9NVA4 438 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 KIF13BQ9NQT8 1826 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PTPRZ1P23471 2315 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 TMEM129A0AVI4 362 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 ADH5P11766 374 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PCMT1P22061 227 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PDHA2P29803 388 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 BAK1Q16611 211 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 CREB3L4Q8TEY5 395 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 C5AR2Q9P296 337 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PPT2Q9UMR5 302 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 INSL5Q9Y5Q6 135 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 TRAV18A0A075B6X5 111 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 SNAPINO95295 136 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 ELAVL4P26378 380 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 GPR143P51810 404 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 AMZ1Q400G9 498 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 CDNFQ49AH0 187 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 TP53I3Q53FA7 332 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 MTFR2Q6P444 385 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC39A5Q6ZMH5 540 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PNLDC1Q8NA58 520 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 SMAP2Q8WU79 429 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 ACTRT3Q9BYD9 372 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 DPH1Q9BZG8 443 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 PELI2Q9HAT8 420 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 CENPMQ9NSP4 180 aa16.2■□□□□ 0.18
HMGXB3-201ENST00000502717 BORCS7-ASMTA0A0B4J1R7 106 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 GMFGO60234 142 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 DNAJB6O75190 326 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 AK1P00568 194 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 ASGR2P07307 311 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 GPR176Q14439 515 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 KCTD18Q6PI47 426 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 APOOLQ6UXV4 268 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF680Q8NEM1 530 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 OR5M3Q8NGP4 307 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 DPH7Q9BTV6 452 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 TAPBPLQ9BX59 468 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 ACTL8Q9H568 366 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 CHMP1AQ9HD42 196 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 RLIMQ9NVW2 624 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 VEGFDO43915 354 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 MMP2P08253 660 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 DUSP3P51452 185 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 CLDN20P56880 219 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 S100A12P80511 92 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 NKG7Q16617 165 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 MLIPQ5VWP3 458 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 SFXN4Q6P4A7 337 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 LRRC25Q8N386 305 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 OR1J4Q8NGS1 313 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 HAVCR2Q8TDQ0 301 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 TBC1D20Q96BZ9 403 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 MAS1P04201 325 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 AKAIN1P0CW23 69 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 XCR1P46094 333 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 CYCSP99999 105 aaKnown RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 CRYZQ08257 329 aaKnown RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 RASGEF1BQ0VAM2 473 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 RAB11BQ15907 218 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 GRASPQ7Z6J2 395 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 TTC9BQ8N6N2 239 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 LKAAEAR1Q8TD35 194 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 MAP6Q96JE9 813 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 C4orf36Q96KX1 117 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 CPED1A4D0V7 1026 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 ASPDHA6ND91 283 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 HNRNPA1P09651 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 RAB40ALP0C0E4 278 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 HOXB2P14652 356 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 DLSTP36957 453 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 GDNFP39905 211 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 DUSP7Q16829 419 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 SIAH3Q8IW03 269 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC38A5Q8WUX1 472 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 RAB40AQ8WXH6 277 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC25A36Q96CQ1 311 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 OPALINQ96PE5 141 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 OR2A14Q96R47 310 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF700Q9H0M5 742 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 EGLN3Q9H6Z9 239 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 MEPEQ9NQ76 525 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 POT1Q9NUX5 634 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 VNN3Q9NY84 501 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC7A7Q9UM01 511 aa16.19■□□□□ 0.18
HMGXB3-201ENST00000502717 EEF1E1-BLOC1S5C9J1V9 151 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 AKR7A2O43488 359 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 EPHA2P29317 976 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 AHRP35869 848 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 GATMP50440 423 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 MBTPS1Q14703 1052 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 TOR2AQ5JU69 321 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF776Q68DI1 518 aaPredicted RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 OR4K13Q8NH42 304 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF559Q9BR84 538 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 ACER3Q9NUN7 267 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF226Q9NYT6 803 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 MUTYHQ9UIF7 546 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms