RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 MSX1P28360 303 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 NUDT2P50583 147 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 GZMMP51124 257 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 CDK6Q00534 326 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 FGFBP1Q14512 234 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
RNF4-202ENST00000502316 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
RNF4-202ENST00000502316 ARPINQ7Z6K5 226 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 PTOV1Q86YD1 416 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
RNF4-202ENST00000502316 GHDCQ8N2G8 530 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 GATSQ8NAP1 163 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 FAM71CQ8NEG0 241 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 BBS10Q8TAM1 723 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 DTNBP1Q96EV8 351 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 HOPXQ9BPY8 73 aaPredicted RBP12.9□□□□□ -0.34
RNF4-202ENST00000502316 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 OR2B2Q9GZK3 357 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 QRSL1Q9H0R6 528 aaKnown RBP12.9□□□□□ -0.34
RNF4-202ENST00000502316 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 ARL8BQ9NVJ2 186 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 SEC14L3Q9UDX4 400 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 TAGLN3Q9UI15 199 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 MRPS18CQ9Y3D5 142 aaKnown RBP12.9□□□□□ -0.34
RNF4-202ENST00000502316 L3MBTL1Q9Y468 752 aa12.9□□□□□ -0.34
RNF4-202ENST00000502316 ZNF407Q9C0G0 2248 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 HCN1O60741 890 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 PGM3O95394 542 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 DBIP07108 87 aaKnown RBP12.89□□□□□ -0.35
RNF4-202ENST00000502316 UBL4AP11441 157 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 ETS2P15036 469 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 SRD5A2P31213 254 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 DSCR4P56555 118 aaPredicted RBP12.89□□□□□ -0.35
RNF4-202ENST00000502316 PLAURQ03405 335 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 ZNF117Q03924 483 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 CYP51A1Q16850 503 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 RPS26P11Q5JNZ5 115 aaPredicted RBP12.89□□□□□ -0.35
RNF4-202ENST00000502316 REEP3Q6NUK4 255 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 TRILQ7L0X0 811 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
RNF4-202ENST00000502316 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 ZNF614Q8N883 585 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 C11orf65Q8NCR3 313 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 FAM83FQ8NEG4 500 aaPredicted RBP12.89□□□□□ -0.35
RNF4-202ENST00000502316 OR4K17Q8NGC6 315 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 OR10A6Q8NH74 314 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 NFKBIDQ8NI38 313 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 PHOSPHO1Q8TCT1 267 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 DSN1Q9H410 356 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 PTGES2Q9H7Z7 377 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 MED11Q9P086 117 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 TENM4Q6N022 2769 aa12.89□□□□□ -0.35
RNF4-202ENST00000502316 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
RNF4-202ENST00000502316 ANKUB1A6NFN9 424 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ZNF264O43296 627 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 HCRTR2O43614 444 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 EIF4E2O60573 245 aaKnown RBP12.88□□□□□ -0.35
RNF4-202ENST00000502316 DNAJA2O60884 412 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 THBS1P07996 1170 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 NID1P14543 1247 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 DPP4P27487 766 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 PGM1P36871 562 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
RNF4-202ENST00000502316 PCBP3P57721 371 aaKnown RBP12.88□□□□□ -0.35
RNF4-202ENST00000502316 KCNJ10P78508 379 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 SKP2Q13309 424 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ART3Q13508 389 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 SCARB2Q14108 478 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 CBLN3Q6UW01 205 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 GFRALQ6UXV0 394 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 FGD2Q7Z6J4 655 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 SLC30A8Q8IWU4 369 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 SLC15A3Q8IY34 581 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 PEX5LQ8IYB4 626 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 HIPK4Q8NE63 616 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 B4GALNT2Q8NHY0 566 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 NEIL3Q8TAT5 605 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 C1GALT1C1Q96EU7 318 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 REXO5Q96IC2 774 aaKnown RBP12.88□□□□□ -0.35
RNF4-202ENST00000502316 ZNF583Q96ND8 569 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ECSITQ9BQ95 431 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.88□□□□□ -0.35
RNF4-202ENST00000502316 CMTM6Q9NX76 183 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ABCD2Q9UBJ2 740 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 CARD8Q9Y2G2 431 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 ZNF835Q9Y2P0 537 aa12.88□□□□□ -0.35
RNF4-202ENST00000502316 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms