RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CNGA4Q8IV77 575 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 NELFCDQ8IXH7 590 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 SELENOHQ8IZQ5 122 aaKnown RBP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 NAGSQ8N159 534 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 FAM58AQ8N1B3 248 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 FGFRL1Q8N441 504 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 PQLC3Q8N755 202 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 LRTM2Q8N967 370 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 COLGALT1Q8NBJ5 622 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RELL2Q8NC24 303 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RNF149Q8NC42 400 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 TRPV1Q8NER1 839 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR4C5Q8NGB2 326 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR4D5Q8NGN0 318 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR13C3Q8NGS6 347 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RHEBL1Q8TAI7 183 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 ERMNQ8TAM6 284 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 MARCH1Q8TCQ1 289 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 DTX3LQ8TDB6 740 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 FAM3CQ92520 227 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC25A36Q96CQ1 311 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 C10orf35Q96D05 121 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 BPIFA2Q96DR5 249 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 UHRF2Q96PU4 802 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 ACCSQ96QU6 501 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RIT2Q99578 217 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 ACBD6Q9BR61 282 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 TRAF4Q9BUZ4 470 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RAB11FIP5Q9BXF6 653 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 ARRDC1-AS1Q9H2J1 176 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 KLHL31Q9H511 634 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 NARFLQ9H6Q4 476 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 LPAR2Q9HBW0 351 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RAVER2Q9HCJ3 691 aaKnown RBP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 PXMP2Q9NR77 195 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 SEMA4GQ9NTN9 838 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 C20orf96Q9NUD7 363 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 TMEM45AQ9NWC5 275 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 C1orf123Q9NWV4 160 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 PLEK2Q9NYT0 353 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 TECRQ9NZ01 308 aaKnown RBP3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RPH3ALQ9UNE2 315 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 RASD1Q9Y272 281 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF175Q9Y473 711 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 COLEC10Q9Y6Z7 277 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 ASTN1O14525 1302 aa3.87□□□□□ -1.79
HMGB1P21-201ENST00000502313 MGAMO43451 1857 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PPIAL4EA0A075B759 164 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 MED19A0JLT2 244 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SMCO3A2RU48 225 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 LRRC30A6NM36 301 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TRPC5OSA6NMA1 111 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 A8MU76 341 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PDLIM1O00151 329 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 NR5A2O00482 541 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TIMM23O14925 209 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZBTB5O15062 677 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 RS1O15537 224 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC28A2O43868 658 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SCGNO76038 276 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CTDNEP1O95476 244 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PLEKP08567 350 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PPIAL4FP0DN26 164 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CD59P13987 128 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TNNI1P19237 187 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GPX3P22352 226 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 OXTRP30559 389 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 YWHAGP61981 247 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CX3CL1P78423 397 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TAF10Q12962 218 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GNA13Q14344 377 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GK3PQ14409 553 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CDKN3Q16667 212 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PHKG1Q16816 387 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ASPHD1Q5U4P2 390 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GPR157Q5UAW9 335 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TMEM64Q6YI46 380 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 C19orf35Q6ZS72 473 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CYP4V2Q6ZWL3 525 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 Q7L0L9 218 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF627Q7L945 461 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 NLRP9Q7RTR0 991 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 SSX9Q7RTT3 188 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 COX8CQ7Z4L0 72 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 ACOT1Q86TX2 421 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GPBP1Q86WP2 473 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 RNF130Q86XS8 419 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 LRRC8AQ8IWT6 810 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 GABRG1Q8N1C3 465 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 PRSS35Q8N3Z0 413 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 TMEM99Q8N816 258 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CEP112Q8N8E3 955 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 DNAAF3Q8N9W5 541 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 POC1AQ8NBT0 407 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CCDC197Q8NCU1 140 aa3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 CHDHQ8NE62 594 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 NFAM1Q8NET5 270 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR5AU1Q8NGC0 362 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms