RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 OR5T3Q8NGG3 340 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 OR51G2Q8NGK0 314 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 FANK1Q8TC84 345 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 PATE1Q8WXA2 126 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 AP3S1Q92572 193 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 SIPA1Q96FS4 1042 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF486Q96H40 463 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 POM121Q96HA1 1249 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 RIPOR3Q96MK2 946 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 OR52D1Q9H346 318 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 PIGUQ9H490 435 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 MED20Q9H944 212 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 MARCH7Q9H992 704 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ISG20L2Q9H9L3 353 aaKnown RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 CACYBPQ9HB71 228 aaKnown RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ATP13A2Q9NQ11 1180 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 EVA1BQ9NVM1 165 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ACTR10Q9NZ32 417 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF221Q9UK13 617 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 C19orf53Q9UNZ5 99 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 TRAPPC13A5PLN9 417 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 OR6C74A6NCV1 312 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 UNC119BA6NIH7 251 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 CD8B2A6NJW9 211 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 AGRPO00253 132 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 SEC14L5O43304 696 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 LYPD3O95274 346 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 EIF2S1P05198 315 aaKnown RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 CD8BP10966 210 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 TLX1P31314 330 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ATP6V1E1P36543 226 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 LSSP48449 732 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 PLAURQ03405 335 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ACSM1Q08AH1 577 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 EXOSC6Q5RKV6 272 aaKnown RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF322Q6U7Q0 402 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 RANBP3LQ86VV4 465 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 GDPD1Q8N9F7 314 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 TOR1AIP2Q8NFQ8 470 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 OR52N1Q8NH53 320 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 NEIL3Q8TAT5 605 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 BRIX1Q8TDN6 353 aaKnown RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 ATF6BQ99941 703 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 HCAR1Q9BXC0 346 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 SLC22A4Q9H015 551 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 TNFRSF10DQ9UBN6 386 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 MALT1Q9UDY8 824 aa9.16□□□□□ -0.94
CLIP1-204ENST00000501271 NDRG2Q9UN36 371 aaKnown RBP9.16□□□□□ -0.94
CLIP1-204ENST00000501271 C2orf92A0A1B0GVN3 265 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 MEIOCA2RUB1 952 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 A8MV72 311 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 H0YGG7 62 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 BHLHE40O14503 412 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CHST10O43529 356 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 HPGDSO60760 199 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 HMGN1P05114 100 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 NID1P14543 1247 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TBXA2RP21731 343 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 APEX1P27695 318 aaKnown RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ARF3P61204 181 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 EXOSC7Q15024 291 aaKnown RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 OR1Q1Q15612 314 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SLC35F1Q5T1Q4 408 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 NIPAL3Q6P499 406 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CNIH2Q6PI25 160 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 FIGNL1Q6PIW4 674 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SMARCD3Q6STE5 483 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ABHD13Q7L211 337 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 GATAD2AQ86YP4 633 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SFTPA2Q8IWL1 248 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 UBE2J2Q8N2K1 259 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 NLGN4YQ8NFZ3 816 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 DNAJA4Q8WW22 397 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CAPSLQ8WWF8 208 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ASB12Q8WXK4 309 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 FAM3CQ92520 227 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 KIAA1143Q96AT1 154 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 NACC2Q96BF6 587 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CDCA3Q99618 268 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 TIMP4Q99727 224 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 JAM3Q9BX67 310 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 KRCC1Q9NPI7 259 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SIDT1Q9NXL6 827 aaKnown RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ITGB1BP2Q9UKP3 347 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 A0A0B4J293 547 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CDHR4A6H8M9 788 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 URADA6NGE7 173 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 PLA2G10O15496 165 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 STX11O75558 287 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CSF2P04141 144 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 HLA-DPB1P04440 258 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 ATP1B1P05026 303 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 KRT8P05787 483 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 DBIP07108 87 aaKnown RBP9.15□□□□□ -0.94
CLIP1-204ENST00000501271 CT62P0C5K7 136 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 IFI30P13284 250 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 NT5EP21589 574 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 PPP3R1P63098 170 aa9.15□□□□□ -0.94
CLIP1-204ENST00000501271 SHC2P98077 582 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms