RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 DLX3O60479 287 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-212ENST00000498540 FAM157CP0CG43 387 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 SFTPDP35247 375 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 SERPINB9P50453 376 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-212ENST00000498540 SLC29A2Q14542 456 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 C6orf52Q5T4I8 152 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 CPTPQ5TA50 214 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 DNAJC14Q6Y2X3 702 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-212ENST00000498540 ZAR1Q86SH2 424 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 TUSC5Q8IXB3 177 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 BANPQ8N9N5 519 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 PIWIL2Q8TC59 973 aaKnown RBP13.06□□□□□ -0.32
TRAF4-212ENST00000498540 GPR151Q8TDV0 419 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 DCAKDQ8WVC6 231 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 HSD17B8Q92506 261 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-212ENST00000498540 KLHL15Q96M94 604 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 C3orf14Q9HBI5 128 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 MYNNQ9NPC7 610 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 KLHL13Q9P2N7 655 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
TRAF4-212ENST00000498540 POLR3HQ9Y535 204 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-212ENST00000498540 SSX4O60224 188 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 RAMP1O60894 148 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ADAP00813 363 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ENO1P06733 434 aaKnown RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 PTNP21246 168 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ME2P23368 584 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 MAP3K8P41279 467 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 CARD18P57730 90 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 HSPB3Q12988 150 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 GLE1Q53GS7 698 aaKnown RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 TMEM201Q5SNT2 666 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 PDSS1Q5T2R2 415 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 GTF2IRD2BQ6EKJ0 949 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ZNF551Q7Z340 670 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 GTF2IRD2Q86UP8 949 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 DTX2Q86UW9 622 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 FBXO30Q8TB52 745 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ACTRT2Q8TDY3 377 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 HOXB13Q92826 284 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 KISS1RQ969F8 398 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 POTEKPQ9BYX7 375 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 CDC42EP4Q9H3Q1 356 aaKnown RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ALG2Q9H553 416 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 BARX1Q9HBU1 254 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-212ENST00000498540 TMEM216Q9P0N5 145 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 SNX8Q9Y5X2 465 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
TRAF4-212ENST00000498540 TTC36A6NLP5 189 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 SHISA9B4DS77 424 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 POC1B-GALNT4F8VUJ3 575 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 NKX2-2O95096 273 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 NGFRP08138 427 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 LINGO3P0C6S8 592 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 TAC1P20366 129 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 FOXA1P55317 472 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 C21orf58P58505 322 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 FOXF1Q12946 379 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 LCP2Q13094 533 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
TRAF4-212ENST00000498540 CD226Q15762 336 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 KRTAP24-1Q3LI83 254 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 TRABD2AQ86V40 505 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 RHNO1Q9BSD3 238 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
TRAF4-212ENST00000498540 B3GALT5Q9Y2C3 310 aa13.04□□□□□ -0.32
TRAF4-212ENST00000498540 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 SERTM1A2A2V5 107 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 ZNF814B7Z6K7 855 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 EFNA2O43921 213 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 KCNK2O95069 426 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 IFI6P09912 130 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 ACP2P11117 423 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 PRPS2P11908 318 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 IMPDH1P20839 514 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 PRIM2P49643 509 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 MANFP55145 182 aaKnown RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 CDH11P55287 796 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 PKNOX1P55347 436 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 ITGADQ13349 1161 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 P2RY6Q15077 328 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 TMEM249Q2WGJ8 235 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 FCRLAQ7L513 359 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 BHLHA15Q7RTS1 189 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 RELL1Q8IUW5 271 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 MMGT1Q8N4V1 131 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 CPNE4Q96A23 557 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 CIDECQ96AQ7 238 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 GIMAP5Q96F15 307 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 OTUB1Q96FW1 271 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 REXO5Q96IC2 774 aaKnown RBP13.03□□□□□ -0.32
TRAF4-212ENST00000498540 EGLN2Q96KS0 407 aa13.03□□□□□ -0.32
TRAF4-212ENST00000498540 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms