RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 RCBTB2O95199 551 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 IL18BPO95998 194 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 RNF144AP50876 292 aaPredicted RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SUCLG1P53597 346 aaKnown RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 NME5P56597 212 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 CLDN15P56746 228 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 MYBPHQ13203 477 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 DPY19L1Q2PZI1 675 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 TMEM44Q2T9K0 475 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 FBXL19-AS1Q494R0 122 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 AGBL2Q5U5Z8 902 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 ANXA8L1Q5VT79 327 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 C6orf120Q7Z4R8 191 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 WDR75Q8IWA0 830 aaKnown RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 GCNT2Q8N0V5 402 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SMPDL3BQ92485 455 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 RNASE6Q93091 150 aaKnown RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 ARL8AQ96BM9 186 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 INTS12Q96CB8 462 aaKnown RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SLC35G5Q96KT7 338 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 TEX37Q96LM6 180 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 ZNF559Q9BR84 538 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SFXN3Q9BWM7 321 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 SLC24A3Q9HC58 644 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 PCDHGB4Q9UN71 923 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 CCDC168Q8NDH2 2452 aa16.6■□□□□ 0.25
HOXD11-202ENST00000498438 ANKRD17O75179 2603 aaKnown RBP16.6■□□□□ 0.25
HOXD11-202ENST00000498438 A0A087WZY1 265 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 PRSS51A0A1B0GVH4 220 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 SLC22A20A6NK97 555 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 CPSF4O95639 269 aaKnown RBP16.59■□□□□ 0.25
HOXD11-202ENST00000498438 TGM6O95932 706 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 ZNF17P17021 662 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 MATN1P21941 496 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 ZNF41P51814 821 aaPredicted RBP16.59■□□□□ 0.25
HOXD11-202ENST00000498438 CLDN20P56880 219 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 UFM1P61960 85 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 FAM174BQ3ZCQ3 159 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 FLYWCH1Q4VC44 716 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 CHMP1BQ7LBR1 199 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 SPATA19Q7Z5L4 167 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 ZNF527Q8NB42 609 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 VPS37AQ8NEZ2 397 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 KLHDC3Q9BQ90 382 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 HOXD1Q9GZZ0 328 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 MED17Q9NVC6 651 aa16.59■□□□□ 0.25
HOXD11-202ENST00000498438 C9JVG2 144 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 SLCO1B7G3V0H7 640 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 UQCRC2P22695 453 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 S100A3P33764 101 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 CASP9P55211 416 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 EEFSECP57772 596 aaKnown RBP16.58■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF117Q03924 483 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 PLPPR5Q32ZL2 321 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 KLHL26Q53HC5 615 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.58■□□□□ 0.24
HOXD11-202ENST00000498438 P4HA3Q7Z4N8 544 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 GTPBP8Q8N3Z3 284 aaPredicted RBP16.58■□□□□ 0.24
HOXD11-202ENST00000498438 B4GALNT2Q8NHY0 566 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 PHOSPHO1Q8TCT1 267 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 ACTRT2Q8TDY3 377 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 NPAS1Q99742 590 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 PINK1Q9BXM7 581 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 JKAMPQ9P055 326 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 FOXD3Q9UJU5 478 aaPredicted RBP16.58■□□□□ 0.24
HOXD11-202ENST00000498438 AP4B1Q9Y6B7 739 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 SPG11Q96JI7 2443 aa16.58■□□□□ 0.24
HOXD11-202ENST00000498438 DUXAA6NLW8 204 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 NPIPB9F8W1W9 429 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 KLF11O14901 512 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 OIP5O43482 229 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 IL12AP29459 219 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 KIR2DL3P43628 341 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 ATP12AP54707 1039 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 SLC9B1Q4ZJI4 515 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 NXNQ6DKJ4 435 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 MAVSQ7Z434 540 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
HOXD11-202ENST00000498438 GGNQ86UU5 652 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 LURAP1LQ8IV03 231 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 ZZZ3Q8IYH5 903 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 METTL25Q8N6Q8 603 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF614Q8N883 585 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 CHDHQ8NE62 594 aaPredicted RBP16.57■□□□□ 0.24
HOXD11-202ENST00000498438 MIPOL1Q8TD10 442 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 FIG4Q92562 907 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF75CPQ92670 426 aaPredicted RBP16.57■□□□□ 0.24
HOXD11-202ENST00000498438 ZBTB8AQ96BR9 441 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 ZNF845Q96IR2 970 aaPredicted RBP16.57■□□□□ 0.24
HOXD11-202ENST00000498438 RNF145Q96MT1 663 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 CCDC115Q96NT0 180 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 SDF2Q99470 211 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 OR51I1Q9H343 314 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 GPR45Q9Y5Y3 372 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 OTOGQ6ZRI0 2925 aa16.57■□□□□ 0.24
HOXD11-202ENST00000498438 A0A1W2PNV4 684 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 C7orf72A4D263 438 aa16.56■□□□□ 0.24
HOXD11-202ENST00000498438 H3BNH8 94 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms