RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 FUT1P19526 365 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ACAT1P24752 427 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 MAP3K8P41279 467 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TSFMP43897 325 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ALDH3B2P48448 385 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NRIP1P48552 1158 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 POU3F4P49335 361 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NUDT2P50583 147 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NEK3P51956 506 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LGALS4P56470 323 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TAS2R31P59538 309 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NANOS3P60323 173 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ERVK-21P61565 698 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PPIAP62937 165 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SARNPP82979 210 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 GUCY2DQ02846 1103 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FMODQ06828 376 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LGALS3BPQ08380 585 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 RAPSNQ13702 412 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MTF1Q14872 753 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF169Q14929 603 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 PPA1Q15181 289 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MPPED2Q15777 294 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EIPR1Q53HC9 387 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CFAP157Q5JU67 520 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SYCP2LQ5T4T6 812 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLFN13Q68D06 897 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NANOGP8Q6NSW7 305 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EBLN2Q6P2I7 272 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TMEM270Q6UE05 265 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 BTNL3Q6UXE8 466 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GDPGP1Q6ZNW5 385 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RAPH1Q70E73 1250 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NDUFAF7Q7L592 441 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SPATA19Q7Z5L4 167 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MDP1Q86V88 176 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TPRA1Q86W33 373 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GTPBP8Q8N3Z3 284 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 GALNT4Q8N4A0 578 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC22A24Q8N4F4 322 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CDYL2Q8N8U2 506 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DNAAF3Q8N9W5 541 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PAPD5Q8NDF8 572 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR4D11Q8NGI4 311 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 IL31RAQ8NI17 732 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF519Q8TB69 540 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DQX1Q8TE96 717 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ASB17Q8WXJ9 295 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.31□□□□□ -2.2
XRN1-214ENST00000498077 DYRK2Q92630 601 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DNASE1L2Q92874 299 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRIM43Q96BQ3 446 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 COQ8BQ96D53 544 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PANX1Q96RD7 426 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SPON2Q9BUD6 331 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TBC1D10AQ9BXI6 508 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ILKAPQ9H0C8 392 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 MYLK2Q9H1R3 596 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 BHMT2Q9H2M3 363 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DPAGT1Q9H3H5 408 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MARCH7Q9H992 704 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UGT1A10Q9HAW8 530 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UGT1A8Q9HAW9 530 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ARNT2Q9HBZ2 717 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C1RLQ9NZP8 487 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HEY2Q9UBP5 337 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UBQLN1Q9UMX0 589 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SNURFQ9Y675 71 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 X6R8D5 127 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PLCE1Q9P212 2302 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 A0A087WUU8 490 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NPIPB15A6NHN6 443 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 E7EQL1 145 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 M0QX08 132 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PGRMC2O15173 223 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MATN3O15232 486 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC37A4O43826 429 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FZD7O75084 574 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ADAP1O75689 374 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PSMG1O95456 288 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SERPINC1P01008 464 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FBP1P09467 338 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UBCP0CG48 685 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SCGB1C2P0DMR2 95 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 P0DMU3 169 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FAM231AP0DMU4 169 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FAM231CP0DMU5 169 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SPTBP11277 2137 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRLRP16471 622 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CELP19835 753 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EDNRBP24530 442 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EPHA3P29320 983 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SSTR5P35346 364 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LHX2P50458 406 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NDUFA8P51970 172 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF131P52739 623 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GEMP55040 296 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RPS27AP62979 156 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 UBA52P62987 128 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms