RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MED11Q9P086 117 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 BTNL2Q9UIR0 455 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 ARL2BPQ9Y2Y0 163 aa13.9□□□□□ -0.18
NUP50-219ENST00000497960 RNF103-CHMP3A0A140T963 221 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 MBD3L4A6NDZ8 208 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 MBD3L3A6NE82 208 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 MBD3L5A6NJ08 208 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 C17orf51A8MQB3 221 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 KDM4EB2RXH2 506 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 ANP32DO95626 131 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 IGKV1D-16P01601 117 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 HMGN2P05204 90 aaKnown RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 KRT16P08779 473 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 HPGDP15428 266 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 CAPN3P20807 821 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 LCN1P31025 176 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 TLE4Q04727 773 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 LASP1Q14847 261 aaKnown RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 MAPRE2Q15555 327 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 DUSP5Q16690 384 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.89□□□□□ -0.19
NUP50-219ENST00000497960 GRAMD1BQ3KR37 738 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 C6orf10Q5SRN2 563 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 GKAP1Q5VSY0 366 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 RAET1LQ5VY80 246 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 FIGNL1Q6PIW4 674 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 BLOC1S3Q6QNY0 202 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 CHMP1BQ7LBR1 199 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 MTERF4Q7Z6M4 381 aaKnown RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 FUNDC1Q8IVP5 155 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 DMRTC2Q8IXT2 367 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 MBD3L2Q8NHZ7 208 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 PSMA8Q8TAA3 256 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 ITCHQ96J02 903 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 STACQ99469 402 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 G6PC3Q9BUM1 346 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 ZNF629Q9UEG4 869 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 FAF1Q9UNN5 650 aaPredicted RBP13.89□□□□□ -0.19
NUP50-219ENST00000497960 HCFC1P51610 2035 aa13.89□□□□□ -0.19
NUP50-219ENST00000497960 LINC01387J3KSC0 135 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 RFXANKO14593 260 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 ANGPT2O15123 496 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 NDUFB5O43674 189 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 SCN2BO60939 215 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 SOX30O94993 753 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 KCNK2O95069 426 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 NGFRP08138 427 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 PEPDP12955 493 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 CTSSP25774 331 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 OPRM1P35372 400 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 CHI3L1P36222 383 aaPredicted RBP13.88□□□□□ -0.19
NUP50-219ENST00000497960 LHX2P50458 406 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 POU6F2P78424 691 aaPredicted RBP13.88□□□□□ -0.19
NUP50-219ENST00000497960 KLF10Q13118 480 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 BHLHB9Q6PI77 547 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 SLC2A7Q6PXP3 512 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 GALNT10Q86SR1 603 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 MTDHQ86UE4 582 aaKnown RBP13.88□□□□□ -0.19
NUP50-219ENST00000497960 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 GOT1L1Q8NHS2 421 aaPredicted RBP13.88□□□□□ -0.19
NUP50-219ENST00000497960 FAM110BQ8TC76 370 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 C1GALT1C1Q96EU7 318 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 OTUB1Q96FW1 271 aaPredicted RBP13.88□□□□□ -0.19
NUP50-219ENST00000497960 SLC35G5Q96KT7 338 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 LURAP1Q96LR2 239 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 TM9SF2Q99805 663 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 INPP5KQ9BT40 448 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 BTBD2Q9BX70 525 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 ACTRT3Q9BYD9 372 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 RTN4RQ9BZR6 473 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 PIGUQ9H490 435 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 DUSP22Q9NRW4 184 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 GIN1Q9NXP7 522 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 ARMCX1Q9P291 453 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 KCNN3Q9UGI6 736 aa13.88□□□□□ -0.19
NUP50-219ENST00000497960 ADGRG4Q8IZF6 3080 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 IGLV3-32A0A0A0MS00 114 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 ENO4A6NNW6 628 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 CLCA1A8K7I4 914 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 B4DXG7 233 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 ALG1L2C9J202 215 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 SLC22A2O15244 555 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 DCTN3O75935 186 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 OXSR1O95747 527 aaPredicted RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 IL18BPO95998 194 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 ZNF708P17019 499 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 POU3F2P20265 443 aaPredicted RBP13.87□□□□□ -0.19
NUP50-219ENST00000497960 ATP6V1C1P21283 382 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 TBXA2RP21731 343 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 UQCRC2P22695 453 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 UQCRC1P31930 480 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 PEX19P40855 299 aa13.87□□□□□ -0.19
NUP50-219ENST00000497960 CDKN2CP42773 168 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms