RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 COX18Q8N8Q8 333 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 GATSQ8NAP1 163 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 OR56A1Q8NGH5 318 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 POC1BQ8TC44 478 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 SFXN5Q8TD22 340 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 NINJ1Q92982 152 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 PGM2Q96G03 612 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 ZNF845Q96IR2 970 aaPredicted RBP11.13□□□□□ -0.63
CLDN12-213ENST00000496677 ADGRG7Q96K78 797 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 DUSP26Q9BV47 211 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 CLEC4MQ9H2X3 399 aaPredicted RBP11.13□□□□□ -0.63
CLDN12-213ENST00000496677 MED17Q9NVC6 651 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 ATAD3AQ9NVI7 634 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 PACSIN3Q9UKS6 424 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 EIF3LQ9Y262 564 aaKnown RBP11.13□□□□□ -0.63
CLDN12-213ENST00000496677 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
CLDN12-213ENST00000496677 PRRC2AP48634 2157 aaKnown RBP11.12□□□□□ -0.63
CLDN12-213ENST00000496677 H3BML4 177 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 ADAMDEC1O15204 470 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 OIP5O43482 229 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 EFNA2O43921 213 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SOX30O94993 753 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SNUPNO95149 360 aaKnown RBP11.12□□□□□ -0.63
CLDN12-213ENST00000496677 LINGO3P0C6S8 592 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 MYZAPP0CAP1 466 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 NID1P14543 1247 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 ZNF17P17021 662 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SLC6A8P48029 635 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SLC1A6P48664 564 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 PHC1P78364 1004 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 MAD2L1Q13257 205 aaPredicted RBP11.12□□□□□ -0.63
CLDN12-213ENST00000496677 PLPPR5Q32ZL2 321 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLDN12-213ENST00000496677 AP1ARQ63HQ0 302 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 CHMP1BQ7LBR1 199 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SZRD1Q7Z422 152 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 MISPQ8IVT2 679 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 FNDC9Q8TBE3 224 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 MOAP1Q96BY2 351 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 ZNF524Q96C55 264 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 PRPF18Q99633 342 aaKnown RBP11.12□□□□□ -0.63
CLDN12-213ENST00000496677 PINK1Q9BXM7 581 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SERHL2Q9H4I8 314 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 PLEKHF2Q9H8W4 249 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 NOP53Q9NZM5 478 aaKnown RBP11.12□□□□□ -0.63
CLDN12-213ENST00000496677 ST6GALNAC2Q9UJ37 374 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SNX8Q9Y5X2 465 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 MED13LQ71F56 2210 aa11.12□□□□□ -0.63
CLDN12-213ENST00000496677 SCDO00767 359 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 SEC14L5O43304 696 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 GMFGO60234 142 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 AQP8O94778 261 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 GOSR1O95249 250 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 HRGP04196 525 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 CD8BP10966 210 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 IL11P20809 199 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 BGNP21810 368 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
CLDN12-213ENST00000496677 ART1P52961 327 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
CLDN12-213ENST00000496677 RAC1P63000 192 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 TP53BP2Q13625 1128 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 PON3Q15166 354 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 PDCD2Q16342 344 aaPredicted RBP11.11□□□□□ -0.63
CLDN12-213ENST00000496677 OR4F3Q6IEY1 312 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 P4HA3Q7Z4N8 544 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 MTERF4Q7Z6M4 381 aaKnown RBP11.11□□□□□ -0.63
CLDN12-213ENST00000496677 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 CLECL1Q8IZS7 167 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 OR8J2Q8NGG1 315 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 PPP1R14CQ8TAE6 165 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 ZBTB8AQ96BR9 441 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 ZBTB9Q96C00 473 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 OR7D2Q96RA2 312 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 SDF2Q99470 211 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 FOXC2Q99958 501 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 HOXD1Q9GZZ0 328 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 NEUROD4Q9HD90 331 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
CLDN12-213ENST00000496677 ICAM5Q9UMF0 924 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 VDAC3Q9Y277 283 aa11.11□□□□□ -0.63
CLDN12-213ENST00000496677 MTORP42345 2549 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 A0A0J9YW62 118 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 SH3D21A4FU49 640 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 ESPNB1AK53 854 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 RNASET2O00584 256 aaKnown RBP11.1□□□□□ -0.63
CLDN12-213ENST00000496677 DNAJA2O60884 412 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 NTN1O95631 604 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 TUBBP07437 444 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 KRT16P08779 473 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 CD1EP15812 388 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 ATP12AP54707 1039 aa11.1□□□□□ -0.63
CLDN12-213ENST00000496677 RPS3AP61247 264 aaKnown RBP11.1□□□□□ -0.63
CLDN12-213ENST00000496677 ZNF117Q03924 483 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms