RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 STK32CQ86UX6 486 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 OR5D16Q8NGK9 328 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 ST8SIA1Q92185 356 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 ZBTB8AQ96BR9 441 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 VSTM2LQ96N03 204 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 MCHR1Q99705 422 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 LAT2Q9GZY6 243 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 B3GAT2Q9NPZ5 323 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 NPIPA1Q9UND3 350 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 WIF1Q9Y5W5 379 aa7.94□□□□□ -1.14
U2AF1-212ENST00000496462 TP53BP1Q12888 1972 aaPredicted RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 GMFGO60234 142 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 NQO1P15559 274 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 KDELR2P33947 212 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 PTGER1P34995 402 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 EMDP50402 254 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FOXD4Q12950 439 aaPredicted RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TUBA3CQ13748 450 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FGFBP1Q14512 234 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 NTRK2Q16620 822 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 EIF2S3LQ2VIR3 472 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 PAGE3Q5JUK9 113 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 PDZK1Q5T2W1 519 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 WBP2NLQ6ICG8 309 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TUBA3EQ6PEY2 450 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FAM109AQ8N4B1 249 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FITM2Q8N6M3 262 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 OR10Q1Q8NGQ4 319 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CPPED1Q9BRF8 314 aaPredicted RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TACO1Q9BSH4 297 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 PAIP1Q9H074 479 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 BCL2L10Q9HD36 194 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TP53TG5Q9Y2B4 290 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CNTRLQ7Z7A1 2325 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TRGV5A0A0B4J1U4 118 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 A0A1W2PQD3 144 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 H3BMH7 237 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 SYT5O00445 386 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 GPIP06744 558 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 ACP2P11117 423 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 GABRA1P14867 456 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 HOXC12P31275 282 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 PRKAR1BP31321 381 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FRKP42685 505 aaPredicted RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CORO7P57737 925 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TRIM25Q14258 630 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TIGD3Q6B0B8 471 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 ANKFN1Q8N957 763 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 MPP4Q96JB8 637 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 VAPAQ9P0L0 249 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TESQ9UGI8 421 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CAMK2AQ9UQM7 478 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FAM166BA8MTA8 275 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 OR6B1O95007 311 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 IGKV3-11P04433 115 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FABP3P05413 133 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 NGFRP08138 427 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CT62P0C5K7 136 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FAM87AP0C7U9 286 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 TCEA1P23193 301 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 FASP25445 335 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 SRD5A2P31213 254 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CYBRD1Q53TN4 286 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF730Q6ZMV8 503 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 C9orf40Q8IXQ3 194 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 RNF148Q8N7C7 305 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF615Q8N8J6 731 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 RBM15BQ8NDT2 890 aaKnown RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CHDHQ8NE62 594 aaPredicted RBP7.93□□□□□ -1.14
U2AF1-212ENST00000496462 CATSPER1Q8NEC5 780 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 OR52L1Q8NGH7 329 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 OR5W2Q8NH69 310 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 SLC35B4Q969S0 331 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 V9GYQ6 96 aa7.93□□□□□ -1.14
U2AF1-212ENST00000496462 A0A1W2PQ72 361 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ANKRD33BA6NCL7 494 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 AQP12BA6NM10 295 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ALG1L2C9J202 215 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 MCIDASD6RGH6 385 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 LDLRP01130 860 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 BMP7P18075 431 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 IL12AP29459 219 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GPR85P60893 370 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 CCNJQ5T5M9 372 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 NET1Q7Z628 596 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 AQP12AQ8IXF9 295 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 NFAM1Q8NET5 270 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 PIGXQ8TBF5 258 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 SLC39A7Q92504 469 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 TMEM41AQ96HV5 264 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 SEPHS2Q99611 448 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 SMAD5Q99717 465 aaKnown RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF552Q9H707 407 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 SERHLQ9NQF3 203 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 EMC3Q9P0I2 261 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 ZNF443Q9Y2A4 671 aaPredicted RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 GXYLT2A0PJZ3 443 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 HNRNPRO43390 633 aaKnown RBP7.92□□□□□ -1.14
U2AF1-212ENST00000496462 DNAJB6O75190 326 aa7.92□□□□□ -1.14
U2AF1-212ENST00000496462 SERPINA1P01009 418 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms