RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SERINC4A6NH21 518 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 CLDN24A6NM45 220 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 FXYD1O00168 92 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 GTPBP1O00178 669 aaKnown RBP17.65■□□□□ 0.42
HDAC4-212ENST00000495497 AQP7O14520 342 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 HCRTR2O43614 444 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 SUSD5O60279 629 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 HCN1O60741 890 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 TPOP07202 933 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 GUSBP08236 651 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 GPX2P18283 190 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 HK1P19367 917 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 DSCR4P56555 118 aaPredicted RBP17.65■□□□□ 0.42
HDAC4-212ENST00000495497 KCNC4Q03721 635 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 COQ5Q5HYK3 327 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 GCNT6Q5T4J0 391 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 AP1ARQ63HQ0 302 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 CBLN3Q6UW01 205 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 ARSKQ6UWY0 536 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 OR5M9Q8NGP3 310 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 OR5M1Q8NGP8 315 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 LRRC58Q96CX6 371 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 ARSGQ96EG1 525 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 A4GALTQ9NPC4 353 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 TAS2R10Q9NYW0 307 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 TINAGQ9UJW2 476 aa17.65■□□□□ 0.42
HDAC4-212ENST00000495497 C15orf38-AP3S2A0A0A6YYH1 394 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 SHISA8B8ZZ34 492 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 H3BNH8 94 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 BCAS1O75363 584 aaPredicted RBP17.64■□□□□ 0.41
HDAC4-212ENST00000495497 FAM107AO95990 144 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 BMP2P12643 396 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 NANOGP8Q6NSW7 305 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 C3P1Q6ZMU1 363 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 MTERF4Q7Z6M4 381 aaKnown RBP17.64■□□□□ 0.41
HDAC4-212ENST00000495497 CD163Q86VB7 1156 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 MISPQ8IVT2 679 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 B4GALNT2Q8NHY0 566 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 NFKBIDQ8NI38 313 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 FAM57AQ8TBR7 257 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 C1GALT1C1Q96EU7 318 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 PTGES2Q9H7Z7 377 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 MTHFD2LQ9H903 347 aaPredicted RBP17.64■□□□□ 0.41
HDAC4-212ENST00000495497 NANOGQ9H9S0 305 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 THUMPD1Q9NXG2 353 aaKnown RBP17.64■□□□□ 0.41
HDAC4-212ENST00000495497 CORO2BQ9UQ03 480 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 VDAC3Q9Y277 283 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 L3MBTL1Q9Y468 752 aa17.64■□□□□ 0.41
HDAC4-212ENST00000495497 TMEM247A6NEH6 219 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 AIM2O14862 343 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 SEMA7AO75326 666 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 CYP7B1O75881 506 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 STSP08842 583 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 ARAFP10398 606 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 UBL4AP11441 157 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 BMP7P18075 431 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 CRISP3P54108 245 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 SRSF1Q07955 248 aaKnown RBP eCLIP17.63■□□□□ 0.41
HDAC4-212ENST00000495497 FGFBP1Q14512 234 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 ADRM1Q16186 407 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF630Q2M218 657 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-212ENST00000495497 GXYLT1Q4G148 440 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 RABL3Q5HYI8 236 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 EMC4Q5J8M3 183 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 DCST1Q5T197 706 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 Q6ZPB1 254 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-212ENST00000495497 DOLPP1Q86YN1 238 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 PCYOX1LQ8NBM8 494 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 NPAS1Q99742 590 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 TREX2Q9BQ50 279 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-212ENST00000495497 PIF1Q9H611 641 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 PNPLA3Q9NST1 481 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 ACAD8Q9UKU7 415 aa17.63■□□□□ 0.41
HDAC4-212ENST00000495497 AGAP5A6NIR3 686 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 C5orf58C9J3I9 102 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 LRRTM2O43300 516 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 CSTAP01040 98 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 MSX1P28360 303 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 STARP49675 285 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 PLAURQ03405 335 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 CRYZQ08257 329 aaKnown RBP17.62■□□□□ 0.41
HDAC4-212ENST00000495497 FJX1Q86VR8 437 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 IFNEQ86WN2 208 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 VRK2Q86Y07 508 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 PTOV1Q86YD1 416 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 TMCO5AQ8N6Q1 288 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 OR10A6Q8NH74 314 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 ABTB1Q969K4 478 aaPredicted RBP17.62■□□□□ 0.41
HDAC4-212ENST00000495497 SARAFQ96BY9 339 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF524Q96C55 264 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 UGT2B28Q9BY64 529 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 KAT8Q9H7Z6 458 aaKnown RBP17.62■□□□□ 0.41
HDAC4-212ENST00000495497 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.62■□□□□ 0.41
HDAC4-212ENST00000495497 GID8Q9NWU2 228 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 CALML5Q9NZT1 146 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 ICAM5Q9UMF0 924 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 MRPS18CQ9Y3D5 142 aaKnown RBP17.62■□□□□ 0.41
HDAC4-212ENST00000495497 ZGRF1Q86YA3 2104 aa17.62■□□□□ 0.41
HDAC4-212ENST00000495497 A0A0G2JPF8 293 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 HNRNPCL2B2RXH8 293 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms