RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 VDAC3Q9Y277 283 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 DTNAQ9Y4J8 743 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 DIDO1Q9BTC0 2240 aaKnown RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 ICE1Q9Y2F5 2266 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 HMGN4O00479 90 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 NUDT14O95848 222 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 POU3F2P20265 443 aaPredicted RBP14.44□□□□□ -0.1
LIME1-209ENST00000494776 COL8A1P27658 744 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 HTR1EP28566 365 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 ZNF41P51814 821 aaPredicted RBP14.44□□□□□ -0.1
LIME1-209ENST00000494776 CD226Q15762 336 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 GLYR1Q49A26 553 aaPredicted RBP14.44□□□□□ -0.1
LIME1-209ENST00000494776 ACSF3Q4G176 576 aaPredicted RBP14.44□□□□□ -0.1
LIME1-209ENST00000494776 KLHL26Q53HC5 615 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 HIST2H2BCQ6DN03 193 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 HEPHL1Q6MZM0 1159 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 SLC2A7Q6PXP3 512 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 BLOC1S3Q6QNY0 202 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 CHMP1BQ7LBR1 199 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 OR5M1Q8NGP8 315 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 STON2Q8WXE9 905 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 ROPN1LQ96C74 230 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 SPDL1Q96EA4 605 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 NMUR2Q9GZQ4 415 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 RNF6Q9Y252 685 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 WDR45Q9Y484 360 aa14.44□□□□□ -0.1
LIME1-209ENST00000494776 KLF2Q9Y5W3 355 aaPredicted RBP14.44□□□□□ -0.1
LIME1-209ENST00000494776 A0A087WZY1 265 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 CYSRT1A8MQ03 144 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 H3BML4 177 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 LINC01387J3KSC0 135 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 FCMRO60667 390 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 EPPINO95925 133 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 C1QCP02747 245 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 FREM3P0C091 2139 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 ZCCHC18P0CG32 403 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 PEPDP12955 493 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 CPN1P15169 458 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 CHRNB4P30926 498 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 CRATP43155 626 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 COX20Q5RI15 118 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIME1-209ENST00000494776 PDZK1Q5T2W1 519 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 ARSKQ6UWY0 536 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 OLIG3Q7RTU3 272 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 LACC1Q8IV20 430 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 CCDC71Q8IV32 467 aaPredicted RBP14.43□□□□□ -0.1
LIME1-209ENST00000494776 FUNDC1Q8IVP5 155 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 UBQLNLQ8IYU4 475 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 TMCO5AQ8N6Q1 288 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 ZPLD1Q8TCW7 415 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 ZFP90Q8TF47 636 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 GTF2H4Q92759 462 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 TMEM120AQ9BXJ8 343 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 ZNF350Q9GZX5 532 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 TPT1P8Q9HAU6 139 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 POLE3Q9NRF9 147 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 SLC6A13Q9NSD5 602 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 FGFR1OP2Q9NVK5 253 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 TMEM45AQ9NWC5 275 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 STOML1Q9UBI4 398 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 LIPT1Q9Y234 373 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 CARD8Q9Y2G2 431 aa14.43□□□□□ -0.1
LIME1-209ENST00000494776 OR2M5A3KFT3 312 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 SERINC4A6NH21 518 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 NPIPB9F8W1W9 429 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 CYP7B1O75881 506 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 H6PDO95479 791 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 IL2RAP01589 272 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 NR2F1P10589 423 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 UBL4AP11441 157 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 MDH1P40925 334 aaKnown RBP14.42□□□□□ -0.1
LIME1-209ENST00000494776 LHX2P50458 406 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 P2RX1P51575 399 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 CCR4P51679 360 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 B3GALT5-AS1P59052 145 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 ZNF117Q03924 483 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 SF3A3Q12874 501 aaKnown RBP eCLIP14.42□□□□□ -0.1
LIME1-209ENST00000494776 GTDC1Q4AE62 458 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 RIPPLY2Q5TAB7 128 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 TYW3Q6IPR3 259 aaKnown RBP14.42□□□□□ -0.1
LIME1-209ENST00000494776 ZNF619Q8N2I2 560 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 MEIOBQ8N635 442 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 SMPDL3BQ92485 455 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 ZBTB8AQ96BR9 441 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 AURKBQ96GD4 344 aaPredicted RBP14.42□□□□□ -0.1
LIME1-209ENST00000494776 TRNT1Q96Q11 434 aaKnown RBP14.42□□□□□ -0.1
LIME1-209ENST00000494776 TUBA1CQ9BQE3 449 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 RAD21L1Q9H4I0 556 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 CHST11Q9NPF2 352 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 MED17Q9NVC6 651 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 ZNF337Q9Y3M9 751 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 PCDHB14Q9Y5E9 798 aa14.42□□□□□ -0.1
LIME1-209ENST00000494776 A0A096LPI6 279 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 A0A0G2JNJ9 132 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 TMEM247A6NEH6 219 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 FAM90A27PA6NNH2 459 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 HSPB2A8KAH6 182 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 SHISA8B8ZZ34 492 aa14.41□□□□□ -0.1
LIME1-209ENST00000494776 ZNF264O43296 627 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms