RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 PLBD1Q6P4A8 553 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 FAM122CQ6P4D5 195 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 TRMT11Q7Z4G4 463 aaKnown RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 GDF7Q7Z4P5 450 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 TRAPPC5Q8IUR0 188 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ZBTB44Q8NCP5 570 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 LCORQ96JN0 433 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 LINC00615Q96LM1 132 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 UBQLN3Q9H347 655 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 METTL17Q9H7H0 456 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 PELI2Q9HAT8 420 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 ZNF275Q9NSD4 429 aaPredicted RBP14.31□□□□□ -0.12
SDF4-207ENST00000494748 PIPOXQ9P0Z9 390 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 POMT2Q9UKY4 750 aa14.31□□□□□ -0.12
SDF4-207ENST00000494748 A0A0G2JN53 185 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 MAN2B1O00754 1011 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 GSTZ1O43708 216 aaPredicted RBP14.3□□□□□ -0.12
SDF4-207ENST00000494748 ATF1P18846 271 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 METAP1P53582 386 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ST3GAL3Q11203 375 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 NDUFAF5Q5TEU4 345 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 TMEM64Q6YI46 380 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 OR2T35Q8NGX2 323 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 DTD2Q96FN9 168 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ORAI3Q9BRQ5 295 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 SHARPINQ9H0F6 387 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 C20orf85Q9H1P6 137 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ZCCHC4Q9H5U6 513 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 SLC35C2Q9NQQ7 365 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 NPDC1Q9NQX5 325 aaPredicted RBP14.3□□□□□ -0.12
SDF4-207ENST00000494748 SPG21Q9NZD8 308 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 A0A1W2PPV9 198 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 hCG_1807616A0A1W2PRN6 198 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 TUBAL3A6NHL2 446 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 TOXO94900 526 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ELFN1P0C7U0 828 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 CXCL2P19875 107 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 F8A1P23610 371 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 NCBP2P52298 156 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■■□□□ 13
SDF4-207ENST00000494748 TAS2R38P59533 333 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ZNF311Q5JNZ3 666 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ARL9Q6T311 187 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 MBOAT2Q6ZWT7 520 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 KANSL1Q7Z3B3 1105 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 CEACAM19Q7Z692 300 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 OR2T33Q8NG76 320 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 OR13C5Q8NGS8 318 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 CYB5D2Q8WUJ1 264 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ZNF578Q96N58 590 aaPredicted RBP14.3□□□□□ -0.12
SDF4-207ENST00000494748 AUNIPQ9H7T9 357 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 MAB21L2Q9Y586 359 aa14.3□□□□□ -0.12
SDF4-207ENST00000494748 ATP6V1G2-DDX39BF2Z307 99 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 HOXA2O43364 376 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 LCMT2O60294 686 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 CD53P19397 219 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PTNP21246 168 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PRKAG1P54619 331 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 ZNF805Q5CZA5 627 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PRAMEF8Q5VWM4 474 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PRAMEF7Q5VXH5 474 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 FTMTQ8N4E7 242 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 OR56B4Q8NH76 319 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 DPEP2Q9H4A9 486 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 BEX1Q9HBH7 125 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 FLVCR2Q9UPI3 526 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 TRABD2BA6NFA1 517 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 GLOD5A6NK44 160 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 FGBP02675 491 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PEPDP12955 493 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 SNRPBP14678 240 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 FUT1P19526 365 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 SUZ12Q15022 739 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 RPTNQ6XPR3 784 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 MEPCEQ7L2J0 689 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 PARS2Q7L3T8 475 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 CHMP1BQ7LBR1 199 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PRSS45Q7RTY3 260 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 NRSN1Q8IZ57 195 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 FAM98AQ8NCA5 519 aaKnown RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 TOR1AIP2Q8NFQ8 470 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 OR52H1Q8NGJ2 320 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 DDOQ99489 341 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 SLC46A2Q9BY10 475 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 PRKAG2Q9UGJ0 569 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 ADAM29Q9UKF5 820 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 A0A1W2PQ45 241 aaPredicted RBP14.29□□□□□ -0.12
SDF4-207ENST00000494748 A0A1W2PQY0 241 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 NEDD8-MDP1E9PL57 170 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 BHLHE40O14503 412 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 GMDSO60547 372 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 GCGRP47871 477 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 ARFIP1P53367 373 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 ZNF85Q03923 595 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 TUSC1Q2TAM9 212 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 MTFR2Q6P444 385 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 RNF180Q86T96 592 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 LRRTM4Q86VH4 590 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 C7orf57Q8NEG2 295 aa14.29□□□□□ -0.12
SDF4-207ENST00000494748 NR4A3Q92570 626 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms