RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DHCR7Q9UBM7 475 aaKnown RBP9.47□□□□□ -0.89
LINC00488-201ENST00000494582 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
LINC00488-201ENST00000494582 PLXND1Q9Y4D7 1925 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 FAM183AA6NL82 134 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 CHST10O43529 356 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 PCDH8O95206 1070 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 SNAI1O95863 264 aaPredicted RBP9.46□□□□□ -0.89
LINC00488-201ENST00000494582 VSIG10L2P0DP72 767 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 ZNF35P13682 527 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 PTGFRP43088 359 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 SLC11A2P49281 568 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 CENPAP49450 140 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 LGALS3BPQ08380 585 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 RIPPLY1Q0D2K3 151 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 DEFB115Q30KQ5 88 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 LIPJQ5W064 366 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 ZNF626Q68DY1 528 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 HEPHL1Q6MZM0 1159 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 KIAA1211LQ6NV74 962 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 SERPINA13PQ6UXR4 307 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 RPTNQ6XPR3 784 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 SLC9B2Q86UD5 537 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 NXPE1Q8N323 547 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 OR52I2Q8NH67 350 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 SMAP2Q8WU79 429 aaPredicted RBP9.46□□□□□ -0.89
LINC00488-201ENST00000494582 ASZ1Q8WWH4 475 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 PNPLA2Q96AD5 504 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 ELP4Q96EB1 424 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 FCRL4Q96PJ5 515 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 TM6SF2Q9BZW4 377 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 NOX3Q9HBY0 568 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 NIT2Q9NQR4 276 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 PRDM9Q9NQV7 894 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 MYEF2Q9P2K5 600 aaKnown RBP9.46□□□□□ -0.89
LINC00488-201ENST00000494582 LHX3Q9UBR4 397 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 KLK11Q9UBX7 282 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 EPHA6Q9UF33 1036 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 MOKQ9UQ07 419 aa9.46□□□□□ -0.89
LINC00488-201ENST00000494582 EXOGQ9Y2C4 368 aaKnown RBP9.46□□□□□ -0.89
LINC00488-201ENST00000494582 A0A1W2PRQ8 180 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 IRGMA1A4Y4 181 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 HMSDA8MTL9 139 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 DISC1C4P0D8 188 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 F5H5T6 163 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 J3QRE1 110 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 SULT1B1O43704 296 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 GSTZ1O43708 216 aaPredicted RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 EIF4E2O60573 245 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 PRAMEF2O60811 474 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 PRAF2O60831 178 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 POP7O75817 140 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 CPN1P15169 458 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 NOS3P29474 1203 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 ADH7P40394 386 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 PRMT2P55345 433 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 STXBP1P61764 594 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 SNRPEP62304 92 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 SLC3A1Q07837 685 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 PDE7AQ13946 482 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 APOOLQ6UXV4 268 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 COMMD6Q7Z4G1 85 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 TSPAN33Q86UF1 283 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 THOC6Q86W42 341 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 LRRC56Q8IYG6 542 aaPredicted RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 MEIOBQ8N635 442 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 OR6J1Q8NGC5 347 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 OR51G2Q8NGK0 314 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 PPCDCQ96CD2 204 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 ZNF354BQ96LW1 612 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 TSNAXQ99598 290 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 C7orf50Q9BRJ6 194 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 PTDSS2Q9BVG9 487 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 BTBD1Q9H0C5 482 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 ENTPD4Q9Y227 616 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 FCF1Q9Y324 198 aaKnown RBP9.46□□□□□ -0.9
LINC00488-201ENST00000494582 BACE2Q9Y5Z0 518 aa9.46□□□□□ -0.9
LINC00488-201ENST00000494582 A0A0G2JPF8 293 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 A0A1W2PRB8 838 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 HNRNPCL3B7ZW38 293 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 M0QZQ0 153 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 SCAMP1O15126 338 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 HNRNPCL4P0DMR1 293 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 GNSP15586 552 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 SYN1P17600 705 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
LINC00488-201ENST00000494582 AHRP35869 848 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 TAS2R50P59544 299 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 UBE2IP63279 158 aaKnown RBP9.45□□□□□ -0.9
LINC00488-201ENST00000494582 ZNF763Q0D2J5 394 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 TUSC3Q13454 348 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 RPE65Q16518 533 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 CDKN3Q16667 212 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 STPG1Q5TH74 334 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 C16orf59Q7L2K0 433 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 CAMKVQ8NCB2 501 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 TMEM185AQ8NFB2 350 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 OR6T1Q8NGN1 323 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 BBS10Q8TAM1 723 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 RXFP4Q8TDU9 374 aa9.45□□□□□ -0.9
LINC00488-201ENST00000494582 SPSB2Q99619 263 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms