RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 AGTR1P30556 359 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 CCR4P51679 360 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 CARD18P57730 90 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 RAC1P63000 192 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 GUSBP1Q15486 140 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 GLE1Q53GS7 698 aaKnown RBP8.6□□□□□ -1.03
UBR4-216ENST00000494503 CCNJQ5T5M9 372 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 HMBOX1Q6NT76 420 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 ADAM5Q6NVV9 412 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 IKBIPQ70UQ0 350 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 RELL1Q8IUW5 271 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 GTPBP8Q8N3Z3 284 aaPredicted RBP8.6□□□□□ -1.03
UBR4-216ENST00000494503 TMEM151AQ8N4L1 468 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 BANPQ8N9N5 519 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 CDRT4Q8N9R6 151 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 OR4C3Q8NH37 302 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 CEP70Q8NHQ1 597 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 B4GALNT2Q8NHY0 566 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 RFWD2Q8NHY2 731 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 PHOSPHO1Q8TCT1 267 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 OSTF1Q92882 214 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 KISS1RQ969F8 398 aaPredicted RBP8.6□□□□□ -1.03
UBR4-216ENST00000494503 L3HYPDHQ96EM0 354 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 ZBED6CLQ96FA7 236 aaPredicted RBP8.6□□□□□ -1.03
UBR4-216ENST00000494503 EGLN2Q96KS0 407 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 KLHL15Q96M94 604 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 MS4A4EQ96PG1 132 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 TSSK3Q96PN8 268 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 NPAS1Q99742 590 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 FUT8Q9BYC5 575 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 GSTO2Q9H4Y5 243 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 HHATLQ9HCP6 504 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 GLRX2Q9NS18 164 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 FBXO34Q9NWN3 711 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 GIN1Q9NXP7 522 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 SNX8Q9Y5X2 465 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 PTGDR2Q9Y5Y4 395 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 ALPK2Q86TB3 2170 aa8.6□□□□□ -1.03
UBR4-216ENST00000494503 NUP214P35658 2090 aaPredicted RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 IGHV3-15A0A0B4J1V0 119 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 A0A0J9YW62 118 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 SMIM23A6NLE4 172 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 TTC36A6NLP5 189 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 GJE1A6NN92 205 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 ALG1L2C9J202 215 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 GTPBP1O00178 669 aaKnown RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 RGS14O43566 566 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 RSL1D1O76021 490 aaKnown RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 PSMG1O95456 288 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 IFNA2P01563 188 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 ACP2P11117 423 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 IL11P20809 199 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 SLC7A1P30825 629 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 IDUAP35475 653 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 ACVR1BP36896 505 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 RPL38P63173 70 aaKnown RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 ZNF844Q08AG5 666 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 FOXF1Q12946 379 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR4-216ENST00000494503 WHAMMP3Q1A5X7 153 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 PLPPR5Q32ZL2 321 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 SPDYE7PQ495Y7 208 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 GALNTL6Q49A17 601 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 CPTPQ5TA50 214 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 CLEC6AQ6EIG7 209 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 MFSD12Q6NUT3 480 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 LCA5Q86VQ0 697 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 TUSC5Q8IXB3 177 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 NOA1Q8NC60 698 aaKnown RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 MNS1Q8NEH6 495 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 KBTBD8Q8NFY9 601 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 SMAP2Q8WU79 429 aaPredicted RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 NEUROG1Q92886 237 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 CCDC126Q96EE4 140 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 REG4Q9BYZ8 158 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 LRTM1Q9HBL6 345 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 UBQLN4Q9NRR5 601 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 ZNF701Q9NV72 531 aaPredicted RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 PSMC3IPQ9P2W1 217 aaPredicted RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 LIPT1Q9Y234 373 aa8.59□□□□□ -1.03
UBR4-216ENST00000494503 MAGED1Q9Y5V3 778 aaPredicted RBP8.59□□□□□ -1.03
UBR4-216ENST00000494503 IGLV3-32A0A0A0MS00 114 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 NPIPA5A0A0B4J1W7 369 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 NPIPA7E9PJI5 369 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 H3BNH8 94 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 ADAMDEC1O15204 470 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 TMCC2O75069 709 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 ADAM11O75078 769 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 GLRA3O75311 464 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 KCNK2O95069 426 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 NKX2-2O95096 273 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 CHEK2O96017 543 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 ADAP00813 363 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 FESP07332 822 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 SOD3P08294 240 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 NPIPA8P0DM63 369 aa8.58□□□□□ -1.04
UBR4-216ENST00000494503 PSMB1P20618 241 aaKnown RBP8.58□□□□□ -1.04
UBR4-216ENST00000494503 PTNP21246 168 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms