RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLC6A5Q9Y345 797 aa12□□□□□ -0.49
ERCC3-209ENST00000494464 C2orf72A6NCS6 295 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 PRORSD1PA6NEY8 169 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 IL33O95760 270 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 EPPINO95925 133 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 HSD17B1P14061 328 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 ANPEPP15144 967 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 BMP7P18075 431 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 SRD5A2P31213 254 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 MAP3K8P41279 467 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 CLNS1AP54105 237 aaKnown RBP11.99□□□□□ -0.49
ERCC3-209ENST00000494464 PSMD4P55036 377 aaKnown RBP11.99□□□□□ -0.49
ERCC3-209ENST00000494464 CLDN8P56748 225 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 C21orf58P58505 322 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 DCST1Q5T197 706 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 MSANTD1Q6ZTZ1 278 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 SEM1Q6ZVN7 128 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 YRDCQ86U90 279 aaKnown RBP11.99□□□□□ -0.49
ERCC3-209ENST00000494464 LACC1Q8IV20 430 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 OR10Q1Q8NGQ4 319 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 ABTB1Q969K4 478 aaPredicted RBP11.99□□□□□ -0.49
ERCC3-209ENST00000494464 C14orf79Q96F83 325 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 MS4A4EQ96PG1 132 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 DPY30Q9C005 99 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 MUC13Q9H3R2 512 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 C3orf14Q9HBI5 128 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 FAM120CQ9NX05 1096 aaKnown RBP11.99□□□□□ -0.49
ERCC3-209ENST00000494464 ALKBH4Q9NXW9 302 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 MRPS18CQ9Y3D5 142 aaKnown RBP11.99□□□□□ -0.49
ERCC3-209ENST00000494464 PKDREJQ9NTG1 2253 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 APCP25054 2843 aa11.99□□□□□ -0.49
ERCC3-209ENST00000494464 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 NKX2-6A6NCS4 301 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 HSPB2A8KAH6 182 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 C9JVG2 144 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 FADS1O60427 444 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 DNAJA2O60884 412 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 NKX2-2O95096 273 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 ANP32DO95626 131 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 IL6P05231 212 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 SLC6A2P23975 617 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 SSTR2P30874 369 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 VHLP40337 213 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 PTDSS1P48651 473 aaKnown RBP11.98□□□□□ -0.49
ERCC3-209ENST00000494464 MANFP55145 182 aaKnown RBP11.98□□□□□ -0.49
ERCC3-209ENST00000494464 GFRA1P56159 465 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 BNIP2Q12982 314 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 GAB1Q13480 694 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 TRIM25Q14258 630 aaKnown RBP11.98□□□□□ -0.49
ERCC3-209ENST00000494464 PTGR1Q14914 329 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 HSPB2Q16082 182 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 SLC25A35Q3KQZ1 300 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 PAGE3Q5JUK9 113 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 MEX3BQ6ZN04 569 aaKnown RBP11.98□□□□□ -0.49
ERCC3-209ENST00000494464 LRRC74BQ6ZQY2 392 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 WDR53Q7Z5U6 358 aaPredicted RBP11.98□□□□□ -0.49
ERCC3-209ENST00000494464 DHDDSQ86SQ9 333 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 IFNEQ86WN2 208 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 ZNF295-AS1Q8N0V1 137 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 FADS6Q8N9I5 356 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 CDRT4Q8N9R6 151 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 SLC26A7Q8TE54 656 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 VPS33AQ96AX1 596 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 TESCQ96BS2 214 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 GIMAP5Q96F15 307 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 WDYHV1Q96HA8 205 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 UCK2Q9BZX2 261 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 FBXL2Q9UKC9 423 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 CAMK2AQ9UQM7 478 aa11.98□□□□□ -0.49
ERCC3-209ENST00000494464 DCHS2Q6V1P9 2916 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 MBD3L4A6NDZ8 208 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 MBD3L3A6NE82 208 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 MBD3L5A6NJ08 208 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 CD8B2A6NJW9 211 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 B4DXG7 233 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 H3BNX3 289 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 NME4O00746 187 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 KCNH1O95259 989 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 C8BP07358 591 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 CPN1P15169 458 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 CEACAM8P31997 349 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 TIMP3P35625 211 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 EEFSECP57772 596 aaKnown RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 PRR5P85299 388 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 MS4A2Q01362 244 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 GANABQ14697 944 aaKnown RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 DPY19L1Q2PZI1 675 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 EXOSC6Q5RKV6 272 aaKnown RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 C6orf10Q5SRN2 563 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 NSUN5P2Q63ZY6 315 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 ZCCHC12Q6PEW1 402 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 ENPP6Q6UWR7 440 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 SLC15A3Q8IY34 581 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 NATD1Q8N6N6 113 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 NUP43Q8NFH3 380 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 BHLHE22Q8NFJ8 381 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 OR14L1PQ8NHC6 308 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 MBD3L2Q8NHZ7 208 aaPredicted RBP11.97□□□□□ -0.49
ERCC3-209ENST00000494464 PSMA8Q8TAA3 256 aa11.97□□□□□ -0.49
ERCC3-209ENST00000494464 ZPLD1Q8TCW7 415 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms