RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TFPTP0C1Z6 253 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 UBL4AP11441 157 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 BMP2P12643 396 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 HK1P19367 917 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 CHRNEQ04844 493 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 CAPRIN1Q14444 709 aaKnown RBP11.34□□□□□ -0.59
TRA2A-209ENST00000494255 CD226Q15762 336 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 EIPR1Q53HC9 387 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 WIPI1Q5MNZ9 446 aaPredicted RBP11.34□□□□□ -0.59
TRA2A-209ENST00000494255 AP1ARQ63HQ0 302 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 B4GALNT2Q8NHY0 566 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 FAM57AQ8TBR7 257 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 SLC38A5Q8WUX1 472 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 LRRC58Q96CX6 371 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 CMTM5Q96DZ9 223 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 SH3GL1Q99961 368 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.34□□□□□ -0.59
TRA2A-209ENST00000494255 SUCOQ9UBS9 1254 aaKnown RBP11.34□□□□□ -0.59
TRA2A-209ENST00000494255 ACAD8Q9UKU7 415 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 ZNF835Q9Y2P0 537 aa11.34□□□□□ -0.59
TRA2A-209ENST00000494255 TRGV8A0A0C4DH27 118 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 A0A0G2JPF8 293 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 HNRNPCL2B2RXH8 293 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 HNRNPCL3B7ZW38 293 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NPIPA2E9PIF3 369 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NPIPA3F8WFD2 350 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 EIF4E2O60573 245 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 HNRNPCL1O60812 293 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NUDT14O95848 222 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CSTAP01040 98 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 STSP08842 583 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NUDT7P0C024 238 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 HNRNPCL4P0DMR1 293 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ARAFP10398 606 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 RNF144AP50876 292 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF41P51814 821 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 MTPNP58546 118 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 FGFBP1Q14512 234 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CYP51A1Q16850 503 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 WLSQ5T9L3 541 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 PRAMEF8Q5VWM4 474 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 PRAMEF7Q5VXH5 474 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 Q6ZPB1 254 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 EIF3MQ7L2H7 374 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 FGD2Q7Z6J4 655 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CHERPQ8IWX8 916 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 TMCO5AQ8N6Q1 288 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 RCN3Q96D15 328 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 C1GALT1C1Q96EU7 318 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 LRRC37BQ96QE4 947 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 IKZF5Q9H5V7 419 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 SLC6A5Q9Y345 797 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF407Q9C0G0 2248 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 GTF3C1Q12789 2109 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 A0A087WZY1 265 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 AGAP5A6NIR3 686 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 AIM2O14862 343 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ZNHIT1O43257 154 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF264O43296 627 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CYP7B1O75881 506 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 DBIP07108 87 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 IL7RP16871 459 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 PRDX6P30041 224 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ADH7P40394 386 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 P2RX1P51575 399 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 SUMO3P55854 103 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF117Q03924 483 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 MAPK14Q16539 360 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 RAET1LQ5VY80 246 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NANOGP8Q6NSW7 305 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 AAGABQ6PD74 315 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CD163Q86VB7 1156 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 TREML1Q86YW5 311 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CMIPQ8IY22 773 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 EID3Q8N140 333 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ANKS4BQ8N8V4 417 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 CCDC197Q8NCU1 140 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 OR8J3Q8NGG0 315 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NFKBIDQ8NI38 313 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 WDR60Q8WVS4 1066 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 ABTB1Q969K4 478 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 MAL2Q969L2 176 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 SFXN2Q96NB2 322 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 TREX2Q9BQ50 279 aaPredicted RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 SLC39A3Q9BRY0 314 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 TRIM8Q9BZR9 551 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
TRA2A-209ENST00000494255 RUBCNLQ9H714 662 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 NANOGQ9H9S0 305 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 EFCAB1Q9HAE3 211 aa11.33□□□□□ -0.6
TRA2A-209ENST00000494255 SPRR3Q9UBC9 169 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms