RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CD96P40200 585 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 GDF5P43026 501 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 YAP1P46937 504 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 RGS4P49798 205 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CCR8P51685 355 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 NR0B1P51843 470 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CDH13P55290 713 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 DNAJB13P59910 316 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 IL2P60568 153 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 RAB8AP61006 207 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SSTP61278 116 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 TEKQ02763 1124 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SP140Q13342 867 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ELOAQ14241 798 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 USP10Q14694 798 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 MFSD13AQ14CX5 517 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ABRAXAS2Q15018 415 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CARTPTQ16568 116 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 NDUFA9Q16795 377 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CYP51A1Q16850 503 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 TIMM50Q3ZCQ8 353 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 RNFT1Q5M7Z0 435 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ACER2Q5QJU3 275 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PLAG1Q6DJT9 500 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PAPD4Q6PIY7 484 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CORO6Q6QEF8 472 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 FAM180AQ6UWF9 173 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 GK5Q6ZS86 529 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ZC3HC1Q86WB0 502 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ADGRG3Q86Y34 549 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 KRT73Q86Y46 540 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 VWA5B2Q8N398 1253 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PARP16Q8N5Y8 322 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 BCORP1Q8N888 145 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CAMKVQ8NCB2 501 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 FAM156AQ8NDB6 213 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 MDS2Q8NDY4 140 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 TMEM52Q8NDY8 209 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PLPP5Q8NEB5 264 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 UTP15Q8TED0 518 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CREB3L4Q8TEY5 395 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 FBLIM1Q8WUP2 373 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SLC5A11Q8WWX8 675 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 UFD1Q92890 307 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 TESCQ96BS2 214 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SMIM10Q96HG1 83 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 HYLS1Q96M11 299 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 RBBP8Q99708 897 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 TTYH2Q9BSA4 534 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SARGQ9BW04 601 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 UGT2B28Q9BY64 529 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 C6orf62Q9GZU0 229 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 WDR55Q9H6Y2 383 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CAB39LQ9H9S4 337 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 MEAF6Q9HAF1 191 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 C3orf14Q9HBI5 128 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 KLHL1Q9NR64 748 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 DIMT1Q9UNQ2 313 aaKnown RBP7.57□□□□□ -1.2
HDAC6-234ENST00000493923 USP22Q9UPT9 525 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 ASB4Q9Y574 426 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 CLDN16Q9Y5I7 305 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 FKBP7Q9Y680 259 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 SLC22A7Q9Y694 548 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
HDAC6-234ENST00000493923 A0A096LPK6 155 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 A0A0X1KG70 313 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 FAM95CA0A1B0GW59 222 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 TRBC2A0A5B9 178 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 A8MUA0 341 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 C3orf80F5H4A9 247 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 I3L521 148 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SLC16A6O15403 523 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 TAPBPO15533 448 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 PROM1O43490 865 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 RGS10O43665 173 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 PRAMEF2O60811 474 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SLC22A5O76082 557 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SEMA3DO95025 777 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 INMTO95050 263 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 IFNA7P01567 189 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ALPLP05186 524 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 FHP07954 510 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 ZNF37AP17032 561 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 C4BPBP20851 252 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 MAOAP21397 527 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 HRH2P25021 359 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 HTR1EP28566 365 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 PPP2R1BP30154 601 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 KCNC1P48547 511 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 HOXA1P49639 335 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 GBX2P52951 348 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SLC26A5P58743 744 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 RAB14P61106 215 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 SCN1BQ07699 218 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 RGS1Q08116 209 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 MRPL28Q13084 256 aaKnown RBP7.56□□□□□ -1.2
HDAC6-234ENST00000493923 MAB21L1Q13394 359 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 RUNX2Q13950 521 aa7.56□□□□□ -1.2
HDAC6-234ENST00000493923 TSNQ15631 228 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms