RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 VEZF1Q14119 521 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 MPP2Q14168 576 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TRIP6Q15654 476 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ADIPOQQ15848 244 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 NKAIN1Q4KMZ8 207 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 PPM1JQ5JR12 505 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 MROH9Q5TGP6 573 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TMEM220Q6QAJ8 160 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 WASH2PQ6VEQ5 465 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 KCTD8Q6ZWB6 473 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TRILQ7L0X0 811 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ISCA2Q86U28 154 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 LDB1Q86U70 411 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 NRROSQ86YC3 692 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 BAHD1Q8TBE0 780 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 APOLD1Q96LR9 279 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CPPED1Q9BRF8 314 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TSSK1BQ9BXA7 367 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 NAA50Q9GZZ1 169 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 NEUROD4Q9HD90 331 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 IL1RAPQ9NPH3 570 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SIRT7Q9NRC8 400 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 GFOD1Q9NXC2 390 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ZDHHC3Q9NYG2 299 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TAAR2Q9P1P5 351 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SEC14L4Q9UDX3 406 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 DCTN4Q9UJW0 460 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 A3GALT2U3KPV4 340 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 COL5A1P20908 1838 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ARID1BQ8NFD5 2236 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ZFC3H1O60293 1989 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 WDFY3Q8IZQ1 3526 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TRBV5-4A0A0C4DH59 114 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 FAM237BA0A1B0GVD1 139 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 AGAP14A8MT82 685 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 B9A039 149 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 GTPBP1O00178 669 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CYR61O00622 381 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SELENOFO60613 162 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 RFPL3O75679 317 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 PGAM1P18669 254 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ANXA7P20073 488 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 MYF6P23409 242 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 TLX1P31314 330 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SHMT2P34897 504 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CDH15P55291 814 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 B4GALNT1Q00973 533 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 RASGEF1BQ0VAM2 473 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ECH1Q13011 328 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 POU4F3Q15319 338 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SF1Q15637 639 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 KIAA0930Q6ICG6 404 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 PRSS57Q6UWY2 283 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ZNF547Q8IVP9 402 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SFTPA2Q8IWL1 248 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 C8orf59Q8N0T1 100 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CLDN19Q8N6F1 224 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 CELF2-AS1Q8N7Q2 184 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ACBD4Q8NC06 268 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 NEK7Q8TDX7 302 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 SIGLEC10Q96LC7 697 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 GGACTQ9BVM4 153 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 ZNF768Q9H5H4 540 aaKnown RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 NECTIN3Q9NQS3 549 aa10.84□□□□□ -0.67
BRCA1-222ENST00000493919 MARCH4Q9P2E8 410 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-222ENST00000493919 A0A087X0M5 115 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 A0A1B0GX30 115 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 A6NLC8 198 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 C22orf46C9J442 243 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 QSOX1O00391 747 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 TPP1O14773 563 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 GMFGO60234 142 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 DNAJB6O75190 326 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 KRT33AO76009 404 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 TPOP07202 933 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 CEACAM1P13688 526 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 ZNF7P17097 686 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 LUMP51884 338 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 WDR4P57081 412 aaKnown RBP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 BLOC1S1P78537 153 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 PDIA2Q13087 525 aaKnown RBP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 P2RY14Q15391 338 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 PROX2Q3B8N5 592 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 ZC3HC1Q86WB0 502 aaKnown RBP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 NUDT13Q86X67 352 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 SKA3Q8IX90 412 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 PRSS35Q8N3Z0 413 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 OR10H5Q8NGA6 315 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 ZDHHC1Q8WTX9 485 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 PATE1Q8WXA2 126 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 WFIKKN1Q96NZ8 548 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-222ENST00000493919 TIMM29Q9BSF4 260 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 INPP5KQ9BT40 448 aa10.83□□□□□ -0.68
BRCA1-222ENST00000493919 MED11Q9P086 117 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms