RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 ARHGDIBP52566 201 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 BLVRAP53004 296 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 DEFA1P59665 94 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 DEFA3P59666 94 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 GAS6Q14393 721 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ARHGAP11BQ3KRB8 267 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 FHL5Q5TD97 284 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 CA13Q8N1Q1 262 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 DIO2Q92813 273 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 CDCA4Q9BXL8 241 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 SEMA6CQ9H3T2 930 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 MTHFD2LQ9H903 347 aaPredicted RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 SLC25A19Q9HC21 320 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ADAP2Q9NPF8 381 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 SEMA4GQ9NTN9 838 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 COQ3Q9NZJ6 369 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 MUTYHQ9UIF7 546 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 GPR75O95800 540 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ATP1B1P05026 303 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 HBQ1P09105 142 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 CCNYL3P0C7X3 344 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 NT5EP21589 574 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 RHAGQ02094 409 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ZNF91Q05481 1191 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 SNTA1Q13424 505 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 DEFB110Q30KQ9 67 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 TMEM201Q5SNT2 666 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 TYW3Q6IPR3 259 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 CCDC190Q86UF4 302 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 GJD3Q8N144 294 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 OR8J1Q8NGP2 316 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 C9orf43Q8TAL5 461 aaPredicted RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 INTS12Q96CB8 462 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 USB1Q9BQ65 265 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 MRPL39Q9NYK5 338 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 CA14Q9ULX7 337 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ZNF443Q9Y2A4 671 aaPredicted RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 SGK494L7N484 410 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 DYRK3O43781 588 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 ZNF217O75362 1048 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 PTNP21246 168 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 TRHRP34981 398 aaPredicted RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 LIMK1P53667 647 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 RGS8P57771 180 aaPredicted RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 HOXC5Q00444 222 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 ST3GAL3Q11203 375 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 TRAM2Q15035 370 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 ENTPD8Q5MY95 495 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 TSSK6Q9BXA6 273 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 PIGUQ9H490 435 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 UBE2ZQ9H832 354 aaPredicted RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 NTN1O95631 604 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 CLEC2LP0C7M8 214 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 CD53P19397 219 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 GSTM3P21266 225 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 MAZP56270 477 aaKnown RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 OR2B6P58173 313 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 SPHARQ15513 63 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 TIMM50Q3ZCQ8 353 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 SHFQ7M4L6 423 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 FAM174AQ8TBP5 190 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 SDF2Q99470 211 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
VCP-207ENST00000493886 CLCA2Q9UQC9 943 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 UGT2A1Q9Y4X1 527 aa12.81□□□□□ -0.36
VCP-207ENST00000493886 VCANP13611 3396 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 A0A087WV62 115 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 CENPBD1B2RD01 187 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 PLOD3O60568 738 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 CTSBP07858 339 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 SSTR4P31391 388 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 GIPRP48546 466 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 SLC9A3P48764 834 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 GINS1Q14691 196 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 BAK1Q16611 211 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 CCNJQ5T5M9 372 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 TAPBPLQ9BX59 468 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 NTNG1Q9Y2I2 539 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 A3GALT2U3KPV4 340 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 FAM170BA6NMN3 283 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 STMND1H3BQB6 276 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 TRIM77I1YAP6 450 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 MEN1O00255 615 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 PLD2O14939 933 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 RDH16O75452 317 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 WNT1P04628 370 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 IFNGR2P38484 337 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 RAB38P57729 211 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms