RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 DSCR4P56555 118 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 ADORA2A-AS1P86434 159 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 PMPCAQ10713 525 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 SQLEQ14534 574 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 CDSNQ15517 529 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 EXOSC6Q5RKV6 272 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 C1orf185Q5T7R7 199 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 RAET1LQ5VY80 246 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 AAGABQ6PD74 315 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 XKRXQ6PP77 449 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 SLC2A7Q6PXP3 512 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 APOOLQ6UXV4 268 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 B3GNT6Q6ZMB0 384 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 OLIG3Q7RTU3 272 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 PM20D2Q8IYS1 436 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 RPRMLQ8N4K4 120 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 TMCO5AQ8N6Q1 288 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 RNF138Q8WVD3 245 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 SMPDL3BQ92485 455 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 RND1Q92730 232 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 SDCCAG3Q96C92 435 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 NEURL3Q96EH8 262 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 SDF2Q99470 211 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 TIMP4Q99727 224 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 TMEM120AQ9BXJ8 343 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 UGT2B28Q9BY64 529 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 OR2B2Q9GZK3 357 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 HOXD1Q9GZZ0 328 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 MKLN1Q9UL63 735 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 TRIM33Q9UPN9 1127 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 VDAC3Q9Y277 283 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 DNAJC13O75165 2243 aa9.45□□□□□ -0.9
TRAPPC12-222ENST00000493792 H0Y3Z8 333 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ADAM10O14672 748 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 HCRTR2O43614 444 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 STX11O75558 287 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ACTL6AO96019 429 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 C1QCP02747 245 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 GABRA1P14867 456 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 SSTR2P30874 369 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 CRATP43155 626 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 STARP49675 285 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 CCR4P51679 360 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ZNF41P51814 821 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ATP12AP54707 1039 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 NUP107P57740 925 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 CRYZQ08257 329 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 RCAN2Q14206 197 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ARHGAP11BQ3KRB8 267 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 GTDC1Q4AE62 458 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 DCST1Q5T197 706 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 VASNQ6EMK4 673 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 MSANTD1Q6ZTZ1 278 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 CHMP1BQ7LBR1 199 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ULK2Q8IYT8 1036 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 UBQLNLQ8IYU4 475 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 FADS6Q8N9I5 356 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 OR5M1Q8NGP8 315 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 GOT1L1Q8NHS2 421 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 MIPOL1Q8TD10 442 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 PHF10Q8WUB8 498 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 NTNG2Q96CW9 530 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 SPDL1Q96EA4 605 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 C1GALT1C1Q96EU7 318 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 TRIB1Q96RU8 372 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 DMRTA2Q96SC8 542 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 SIKE1Q9BRV8 207 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 RABEP2Q9H5N1 569 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 HHATLQ9HCP6 504 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 WDR45Q9Y484 360 aa9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 ANKHD1Q8IWZ3 2542 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-222ENST00000493792 FAM90A27PA6NNH2 459 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 H3BML4 177 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 ZIC3O60481 467 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 FCMRO60667 390 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 TNFRSF21O75509 655 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 NGFRP08138 427 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 HOXD4P09016 255 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 NR2F1P10589 423 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 MDH1P40925 334 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 ZFP36L2P47974 494 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 ATP4BP51164 291 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 ARFIP2P53365 341 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 GANABQ14697 944 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 SF3B4Q15427 424 aaKnown RBP eCLIP9.43□□□□□ -0.93e-11■■■■□ 25
TRAPPC12-222ENST00000493792 CD226Q15762 336 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 NDUFAF6Q330K2 333 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 COX20Q5RI15 118 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 PDZK1Q5T2W1 519 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 HMGN2P46Q86SG4 172 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 CCDC71Q8IV32 467 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 MISPQ8IVT2 679 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 MARVELD2Q8N4S9 558 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 ACBD4Q8NC06 268 aa9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 CHDHQ8NE62 594 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-222ENST00000493792 B4GALNT2Q8NHY0 566 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms